Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22733 | 68422;68423;68424 | chr2:178578833;178578832;178578831 | chr2:179443560;179443559;179443558 |
N2AB | 21092 | 63499;63500;63501 | chr2:178578833;178578832;178578831 | chr2:179443560;179443559;179443558 |
N2A | 20165 | 60718;60719;60720 | chr2:178578833;178578832;178578831 | chr2:179443560;179443559;179443558 |
N2B | 13668 | 41227;41228;41229 | chr2:178578833;178578832;178578831 | chr2:179443560;179443559;179443558 |
Novex-1 | 13793 | 41602;41603;41604 | chr2:178578833;178578832;178578831 | chr2:179443560;179443559;179443558 |
Novex-2 | 13860 | 41803;41804;41805 | chr2:178578833;178578832;178578831 | chr2:179443560;179443559;179443558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs754767867 | 0.089 | 0.03 | N | 0.458 | 0.246 | 0.230578612272 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.14E-05 | 1.41163E-04 |
E/A | rs754767867 | 0.089 | 0.03 | N | 0.458 | 0.246 | 0.230578612272 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs754767867 | 0.089 | 0.03 | N | 0.458 | 0.246 | 0.230578612272 | gnomAD-4.0.0 | 1.24118E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69725E-05 | 0 | 0 |
E/G | rs754767867 | -0.144 | 0.058 | N | 0.547 | 0.228 | 0.269111216191 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 0 | 0 |
E/G | rs754767867 | -0.144 | 0.058 | N | 0.547 | 0.228 | 0.269111216191 | gnomAD-4.0.0 | 6.85239E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16439E-05 | 0 |
E/Q | None | None | 0.058 | N | 0.582 | 0.132 | 0.187945064343 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1024 | likely_benign | 0.1 | benign | -0.146 | Destabilizing | 0.03 | N | 0.458 | neutral | N | 0.521748393 | None | None | N |
E/C | 0.6851 | likely_pathogenic | 0.691 | pathogenic | -0.188 | Destabilizing | 0.869 | D | 0.588 | neutral | None | None | None | None | N |
E/D | 0.0718 | likely_benign | 0.0712 | benign | -0.309 | Destabilizing | None | N | 0.133 | neutral | N | 0.466972546 | None | None | N |
E/F | 0.5948 | likely_pathogenic | 0.5878 | pathogenic | -0.026 | Destabilizing | 0.366 | N | 0.58 | neutral | None | None | None | None | N |
E/G | 0.1106 | likely_benign | 0.1157 | benign | -0.303 | Destabilizing | 0.058 | N | 0.547 | neutral | N | 0.476102045 | None | None | N |
E/H | 0.3389 | likely_benign | 0.3451 | ambiguous | 0.525 | Stabilizing | 0.366 | N | 0.491 | neutral | None | None | None | None | N |
E/I | 0.2324 | likely_benign | 0.2239 | benign | 0.222 | Stabilizing | 0.221 | N | 0.609 | neutral | None | None | None | None | N |
E/K | 0.1005 | likely_benign | 0.1014 | benign | 0.435 | Stabilizing | 0.058 | N | 0.513 | neutral | N | 0.497295453 | None | None | N |
E/L | 0.2358 | likely_benign | 0.226 | benign | 0.222 | Stabilizing | 0.039 | N | 0.608 | neutral | None | None | None | None | N |
E/M | 0.3209 | likely_benign | 0.2973 | benign | 0.056 | Stabilizing | 0.869 | D | 0.58 | neutral | None | None | None | None | N |
E/N | 0.1437 | likely_benign | 0.1411 | benign | 0.039 | Stabilizing | 0.039 | N | 0.431 | neutral | None | None | None | None | N |
E/P | 0.2402 | likely_benign | 0.2373 | benign | 0.118 | Stabilizing | 0.366 | N | 0.565 | neutral | None | None | None | None | N |
E/Q | 0.109 | likely_benign | 0.1095 | benign | 0.08 | Stabilizing | 0.058 | N | 0.582 | neutral | N | 0.519190878 | None | None | N |
E/R | 0.1928 | likely_benign | 0.1953 | benign | 0.72 | Stabilizing | 0.221 | N | 0.527 | neutral | None | None | None | None | N |
E/S | 0.1247 | likely_benign | 0.1231 | benign | -0.086 | Destabilizing | 0.039 | N | 0.416 | neutral | None | None | None | None | N |
E/T | 0.1481 | likely_benign | 0.1426 | benign | 0.054 | Stabilizing | None | N | 0.365 | neutral | None | None | None | None | N |
E/V | 0.1491 | likely_benign | 0.1406 | benign | 0.118 | Stabilizing | 0.03 | N | 0.578 | neutral | N | 0.483988857 | None | None | N |
E/W | 0.8223 | likely_pathogenic | 0.8263 | pathogenic | 0.091 | Stabilizing | 0.869 | D | 0.647 | neutral | None | None | None | None | N |
E/Y | 0.4422 | ambiguous | 0.4459 | ambiguous | 0.216 | Stabilizing | 0.637 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.