Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22750 | 68473;68474;68475 | chr2:178578692;178578691;178578690 | chr2:179443419;179443418;179443417 |
N2AB | 21109 | 63550;63551;63552 | chr2:178578692;178578691;178578690 | chr2:179443419;179443418;179443417 |
N2A | 20182 | 60769;60770;60771 | chr2:178578692;178578691;178578690 | chr2:179443419;179443418;179443417 |
N2B | 13685 | 41278;41279;41280 | chr2:178578692;178578691;178578690 | chr2:179443419;179443418;179443417 |
Novex-1 | 13810 | 41653;41654;41655 | chr2:178578692;178578691;178578690 | chr2:179443419;179443418;179443417 |
Novex-2 | 13877 | 41854;41855;41856 | chr2:178578692;178578691;178578690 | chr2:179443419;179443418;179443417 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs764562311 | -1.583 | 0.957 | D | 0.492 | 0.46 | 0.400033932507 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 9.99E-05 | 0 | None | 0 | None | 0 | 0 | 1.67842E-04 |
P/S | rs764562311 | -1.583 | 0.957 | D | 0.492 | 0.46 | 0.400033932507 | gnomAD-4.0.0 | 6.85264E-06 | None | None | None | None | N | None | 2.99904E-05 | 4.49721E-05 | None | 7.66401E-05 | 0 | None | 0 | 0 | 2.70024E-06 | 0 | 3.3195E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5192 | ambiguous | 0.471 | ambiguous | -2.172 | Highly Destabilizing | 0.992 | D | 0.728 | prob.delet. | N | 0.51918709 | None | None | N |
P/C | 0.8642 | likely_pathogenic | 0.8467 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
P/D | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.716 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
P/E | 0.9934 | likely_pathogenic | 0.9942 | pathogenic | -2.499 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
P/F | 0.9925 | likely_pathogenic | 0.9919 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/G | 0.97 | likely_pathogenic | 0.9663 | pathogenic | -2.704 | Highly Destabilizing | 0.997 | D | 0.787 | deleterious | None | None | None | None | N |
P/H | 0.9919 | likely_pathogenic | 0.9914 | pathogenic | -2.352 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.549661608 | None | None | N |
P/I | 0.7017 | likely_pathogenic | 0.6975 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/K | 0.9953 | likely_pathogenic | 0.9959 | pathogenic | -1.722 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
P/L | 0.5314 | ambiguous | 0.4988 | ambiguous | -0.688 | Destabilizing | 0.999 | D | 0.852 | deleterious | N | 0.464984504 | None | None | N |
P/M | 0.8799 | likely_pathogenic | 0.8737 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/N | 0.9958 | likely_pathogenic | 0.9956 | pathogenic | -2.077 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
P/Q | 0.9828 | likely_pathogenic | 0.9826 | pathogenic | -1.934 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/R | 0.988 | likely_pathogenic | 0.9888 | pathogenic | -1.584 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.549661608 | None | None | N |
P/S | 0.9483 | likely_pathogenic | 0.9384 | pathogenic | -2.74 | Highly Destabilizing | 0.957 | D | 0.492 | neutral | D | 0.538051813 | None | None | N |
P/T | 0.8209 | likely_pathogenic | 0.8067 | pathogenic | -2.37 | Highly Destabilizing | 0.998 | D | 0.825 | deleterious | D | 0.549154629 | None | None | N |
P/V | 0.4838 | ambiguous | 0.4556 | ambiguous | -1.156 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
P/W | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -1.712 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/Y | 0.9973 | likely_pathogenic | 0.9974 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.