Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22752 | 68479;68480;68481 | chr2:178578686;178578685;178578684 | chr2:179443413;179443412;179443411 |
N2AB | 21111 | 63556;63557;63558 | chr2:178578686;178578685;178578684 | chr2:179443413;179443412;179443411 |
N2A | 20184 | 60775;60776;60777 | chr2:178578686;178578685;178578684 | chr2:179443413;179443412;179443411 |
N2B | 13687 | 41284;41285;41286 | chr2:178578686;178578685;178578684 | chr2:179443413;179443412;179443411 |
Novex-1 | 13812 | 41659;41660;41661 | chr2:178578686;178578685;178578684 | chr2:179443413;179443412;179443411 |
Novex-2 | 13879 | 41860;41861;41862 | chr2:178578686;178578685;178578684 | chr2:179443413;179443412;179443411 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.198 | N | 0.22 | 0.122 | 0.386395597597 | gnomAD-4.0.0 | 4.79615E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.30049E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3012 | likely_benign | 0.241 | benign | -2.015 | Highly Destabilizing | 0.983 | D | 0.559 | neutral | None | None | None | None | I |
I/C | 0.7063 | likely_pathogenic | 0.6569 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
I/D | 0.9174 | likely_pathogenic | 0.89 | pathogenic | -1.177 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | I |
I/E | 0.859 | likely_pathogenic | 0.8237 | pathogenic | -1.061 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
I/F | 0.2953 | likely_benign | 0.2557 | benign | -1.189 | Destabilizing | 0.997 | D | 0.613 | neutral | N | 0.521423106 | None | None | I |
I/G | 0.8126 | likely_pathogenic | 0.7405 | pathogenic | -2.463 | Highly Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
I/H | 0.7942 | likely_pathogenic | 0.7418 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
I/K | 0.6853 | likely_pathogenic | 0.633 | pathogenic | -1.433 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
I/L | 0.1694 | likely_benign | 0.1486 | benign | -0.799 | Destabilizing | 0.798 | D | 0.412 | neutral | N | 0.45891321 | None | None | I |
I/M | 0.1415 | likely_benign | 0.1263 | benign | -0.793 | Destabilizing | 0.997 | D | 0.611 | neutral | N | 0.483854407 | None | None | I |
I/N | 0.6317 | likely_pathogenic | 0.5795 | pathogenic | -1.447 | Destabilizing | 0.999 | D | 0.798 | deleterious | N | 0.507573949 | None | None | I |
I/P | 0.6309 | likely_pathogenic | 0.5621 | ambiguous | -1.176 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
I/Q | 0.7634 | likely_pathogenic | 0.71 | pathogenic | -1.436 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
I/R | 0.5983 | likely_pathogenic | 0.5265 | ambiguous | -1.032 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
I/S | 0.4869 | ambiguous | 0.4091 | ambiguous | -2.244 | Highly Destabilizing | 0.997 | D | 0.719 | prob.delet. | N | 0.481221061 | None | None | I |
I/T | 0.1832 | likely_benign | 0.1348 | benign | -1.98 | Destabilizing | 0.978 | D | 0.645 | neutral | N | 0.472751591 | None | None | I |
I/V | 0.0639 | likely_benign | 0.0612 | benign | -1.176 | Destabilizing | 0.198 | N | 0.22 | neutral | N | 0.391242636 | None | None | I |
I/W | 0.9038 | likely_pathogenic | 0.872 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/Y | 0.7441 | likely_pathogenic | 0.708 | pathogenic | -1.075 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.