Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22757 | 68494;68495;68496 | chr2:178578671;178578670;178578669 | chr2:179443398;179443397;179443396 |
N2AB | 21116 | 63571;63572;63573 | chr2:178578671;178578670;178578669 | chr2:179443398;179443397;179443396 |
N2A | 20189 | 60790;60791;60792 | chr2:178578671;178578670;178578669 | chr2:179443398;179443397;179443396 |
N2B | 13692 | 41299;41300;41301 | chr2:178578671;178578670;178578669 | chr2:179443398;179443397;179443396 |
Novex-1 | 13817 | 41674;41675;41676 | chr2:178578671;178578670;178578669 | chr2:179443398;179443397;179443396 |
Novex-2 | 13884 | 41875;41876;41877 | chr2:178578671;178578670;178578669 | chr2:179443398;179443397;179443396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.722 | N | 0.469 | 0.2 | 0.191931220699 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3788 | ambiguous | 0.4282 | ambiguous | -0.363 | Destabilizing | 0.775 | D | 0.574 | neutral | None | None | None | None | N |
H/C | 0.1902 | likely_benign | 0.2278 | benign | 0.301 | Stabilizing | 0.996 | D | 0.76 | deleterious | None | None | None | None | N |
H/D | 0.5314 | ambiguous | 0.5445 | ambiguous | -0.182 | Destabilizing | 0.901 | D | 0.495 | neutral | N | 0.386780966 | None | None | N |
H/E | 0.4984 | ambiguous | 0.5381 | ambiguous | -0.16 | Destabilizing | 0.775 | D | 0.427 | neutral | None | None | None | None | N |
H/F | 0.4634 | ambiguous | 0.5171 | ambiguous | -0.032 | Destabilizing | 0.987 | D | 0.525 | neutral | None | None | None | None | N |
H/G | 0.386 | ambiguous | 0.4271 | ambiguous | -0.639 | Destabilizing | 0.775 | D | 0.573 | neutral | None | None | None | None | N |
H/I | 0.6061 | likely_pathogenic | 0.6563 | pathogenic | 0.35 | Stabilizing | 0.961 | D | 0.705 | prob.neutral | None | None | None | None | N |
H/K | 0.244 | likely_benign | 0.2738 | benign | -0.327 | Destabilizing | 0.633 | D | 0.504 | neutral | None | None | None | None | N |
H/L | 0.228 | likely_benign | 0.2623 | benign | 0.35 | Stabilizing | 0.901 | D | 0.634 | neutral | N | 0.479653842 | None | None | N |
H/M | 0.6133 | likely_pathogenic | 0.6735 | pathogenic | 0.372 | Stabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | N |
H/N | 0.199 | likely_benign | 0.2044 | benign | -0.086 | Destabilizing | 0.722 | D | 0.469 | neutral | N | 0.399787549 | None | None | N |
H/P | 0.327 | likely_benign | 0.3612 | ambiguous | 0.136 | Stabilizing | 0.949 | D | 0.667 | neutral | N | 0.418487953 | None | None | N |
H/Q | 0.2202 | likely_benign | 0.2457 | benign | -0.03 | Destabilizing | 0.959 | D | 0.453 | neutral | N | 0.44546391 | None | None | N |
H/R | 0.099 | likely_benign | 0.1074 | benign | -0.604 | Destabilizing | 0.008 | N | 0.313 | neutral | N | 0.370851508 | None | None | N |
H/S | 0.3511 | ambiguous | 0.379 | ambiguous | -0.144 | Destabilizing | 0.775 | D | 0.508 | neutral | None | None | None | None | N |
H/T | 0.5101 | ambiguous | 0.5427 | ambiguous | -0.037 | Destabilizing | 0.923 | D | 0.573 | neutral | None | None | None | None | N |
H/V | 0.5024 | ambiguous | 0.5509 | ambiguous | 0.136 | Stabilizing | 0.923 | D | 0.689 | prob.neutral | None | None | None | None | N |
H/W | 0.4693 | ambiguous | 0.5541 | ambiguous | -0.007 | Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
H/Y | 0.1502 | likely_benign | 0.1716 | benign | 0.388 | Stabilizing | 0.941 | D | 0.48 | neutral | N | 0.516998722 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.