Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22759 | 68500;68501;68502 | chr2:178578665;178578664;178578663 | chr2:179443392;179443391;179443390 |
N2AB | 21118 | 63577;63578;63579 | chr2:178578665;178578664;178578663 | chr2:179443392;179443391;179443390 |
N2A | 20191 | 60796;60797;60798 | chr2:178578665;178578664;178578663 | chr2:179443392;179443391;179443390 |
N2B | 13694 | 41305;41306;41307 | chr2:178578665;178578664;178578663 | chr2:179443392;179443391;179443390 |
Novex-1 | 13819 | 41680;41681;41682 | chr2:178578665;178578664;178578663 | chr2:179443392;179443391;179443390 |
Novex-2 | 13886 | 41881;41882;41883 | chr2:178578665;178578664;178578663 | chr2:179443392;179443391;179443390 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.003 | D | 0.209 | 0.188 | 0.279776271856 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0863 | likely_benign | 0.0814 | benign | -0.336 | Destabilizing | 0.003 | N | 0.209 | neutral | D | 0.524298414 | None | None | N |
S/C | 0.0888 | likely_benign | 0.091 | benign | -0.777 | Destabilizing | 0.024 | N | 0.537 | neutral | None | None | None | None | N |
S/D | 0.7387 | likely_pathogenic | 0.7713 | pathogenic | -2.225 | Highly Destabilizing | 0.961 | D | 0.607 | neutral | None | None | None | None | N |
S/E | 0.7353 | likely_pathogenic | 0.7517 | pathogenic | -2.108 | Highly Destabilizing | 0.775 | D | 0.587 | neutral | None | None | None | None | N |
S/F | 0.2188 | likely_benign | 0.2116 | benign | -0.453 | Destabilizing | 0.961 | D | 0.753 | deleterious | None | None | None | None | N |
S/G | 0.1173 | likely_benign | 0.1231 | benign | -0.629 | Destabilizing | 0.633 | D | 0.553 | neutral | None | None | None | None | N |
S/H | 0.415 | ambiguous | 0.4337 | ambiguous | -1.197 | Destabilizing | 0.996 | D | 0.724 | prob.delet. | None | None | None | None | N |
S/I | 0.2732 | likely_benign | 0.2531 | benign | 0.354 | Stabilizing | 0.923 | D | 0.757 | deleterious | None | None | None | None | N |
S/K | 0.8639 | likely_pathogenic | 0.8706 | pathogenic | -0.629 | Destabilizing | 0.775 | D | 0.587 | neutral | None | None | None | None | N |
S/L | 0.1632 | likely_benign | 0.1466 | benign | 0.354 | Stabilizing | 0.565 | D | 0.68 | prob.neutral | N | 0.515439151 | None | None | N |
S/M | 0.1863 | likely_benign | 0.171 | benign | 0.335 | Stabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/N | 0.2567 | likely_benign | 0.2757 | benign | -1.335 | Destabilizing | 0.961 | D | 0.624 | neutral | None | None | None | None | N |
S/P | 0.9823 | likely_pathogenic | 0.9838 | pathogenic | 0.158 | Stabilizing | 0.949 | D | 0.764 | deleterious | D | 0.522022516 | None | None | N |
S/Q | 0.6161 | likely_pathogenic | 0.6035 | pathogenic | -1.28 | Destabilizing | 0.961 | D | 0.665 | neutral | None | None | None | None | N |
S/R | 0.772 | likely_pathogenic | 0.7927 | pathogenic | -0.751 | Destabilizing | 0.923 | D | 0.776 | deleterious | None | None | None | None | N |
S/T | 0.0918 | likely_benign | 0.0964 | benign | -0.856 | Destabilizing | 0.722 | D | 0.557 | neutral | N | 0.483507797 | None | None | N |
S/V | 0.247 | likely_benign | 0.2216 | benign | 0.158 | Stabilizing | 0.633 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/W | 0.4394 | ambiguous | 0.4891 | ambiguous | -0.836 | Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | N |
S/Y | 0.2361 | likely_benign | 0.2432 | benign | -0.339 | Destabilizing | 0.987 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.