Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22760 | 68503;68504;68505 | chr2:178578662;178578661;178578660 | chr2:179443389;179443388;179443387 |
N2AB | 21119 | 63580;63581;63582 | chr2:178578662;178578661;178578660 | chr2:179443389;179443388;179443387 |
N2A | 20192 | 60799;60800;60801 | chr2:178578662;178578661;178578660 | chr2:179443389;179443388;179443387 |
N2B | 13695 | 41308;41309;41310 | chr2:178578662;178578661;178578660 | chr2:179443389;179443388;179443387 |
Novex-1 | 13820 | 41683;41684;41685 | chr2:178578662;178578661;178578660 | chr2:179443389;179443388;179443387 |
Novex-2 | 13887 | 41884;41885;41886 | chr2:178578662;178578661;178578660 | chr2:179443389;179443388;179443387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.78 | N | 0.588 | 0.174 | 0.454054078574 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | None | None | 0.78 | N | 0.562 | 0.199 | 0.393159880135 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2779 | likely_benign | 0.2542 | benign | -2.225 | Highly Destabilizing | 0.011 | N | 0.29 | neutral | N | 0.494028648 | None | None | N |
V/C | 0.7661 | likely_pathogenic | 0.7271 | pathogenic | -2.149 | Highly Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
V/D | 0.9887 | likely_pathogenic | 0.9887 | pathogenic | -2.694 | Highly Destabilizing | 0.988 | D | 0.837 | deleterious | None | None | None | None | N |
V/E | 0.9782 | likely_pathogenic | 0.9787 | pathogenic | -2.396 | Highly Destabilizing | 0.968 | D | 0.788 | deleterious | D | 0.524359012 | None | None | N |
V/F | 0.5759 | likely_pathogenic | 0.5739 | pathogenic | -1.349 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
V/G | 0.6621 | likely_pathogenic | 0.6257 | pathogenic | -2.844 | Highly Destabilizing | 0.811 | D | 0.745 | deleterious | N | 0.505405383 | None | None | N |
V/H | 0.9895 | likely_pathogenic | 0.9885 | pathogenic | -2.659 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/I | 0.0879 | likely_benign | 0.0865 | benign | -0.453 | Destabilizing | 0.78 | D | 0.588 | neutral | N | 0.467495408 | None | None | N |
V/K | 0.986 | likely_pathogenic | 0.9869 | pathogenic | -1.779 | Destabilizing | 0.976 | D | 0.788 | deleterious | None | None | None | None | N |
V/L | 0.3259 | likely_benign | 0.3144 | benign | -0.453 | Destabilizing | 0.78 | D | 0.562 | neutral | N | 0.48613431 | None | None | N |
V/M | 0.286 | likely_benign | 0.2706 | benign | -0.848 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/N | 0.957 | likely_pathogenic | 0.9534 | pathogenic | -2.344 | Highly Destabilizing | 0.988 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.9871 | likely_pathogenic | 0.9883 | pathogenic | -1.02 | Destabilizing | 0.988 | D | 0.81 | deleterious | None | None | None | None | N |
V/Q | 0.9648 | likely_pathogenic | 0.9626 | pathogenic | -2.023 | Highly Destabilizing | 0.988 | D | 0.808 | deleterious | None | None | None | None | N |
V/R | 0.9711 | likely_pathogenic | 0.9734 | pathogenic | -1.856 | Destabilizing | 0.988 | D | 0.841 | deleterious | None | None | None | None | N |
V/S | 0.7052 | likely_pathogenic | 0.6479 | pathogenic | -3.037 | Highly Destabilizing | 0.851 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/T | 0.5744 | likely_pathogenic | 0.5116 | ambiguous | -2.557 | Highly Destabilizing | 0.919 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9929 | likely_pathogenic | 0.9921 | pathogenic | -1.8 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
V/Y | 0.9542 | likely_pathogenic | 0.9512 | pathogenic | -1.446 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.