Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22770 | 68533;68534;68535 | chr2:178578632;178578631;178578630 | chr2:179443359;179443358;179443357 |
N2AB | 21129 | 63610;63611;63612 | chr2:178578632;178578631;178578630 | chr2:179443359;179443358;179443357 |
N2A | 20202 | 60829;60830;60831 | chr2:178578632;178578631;178578630 | chr2:179443359;179443358;179443357 |
N2B | 13705 | 41338;41339;41340 | chr2:178578632;178578631;178578630 | chr2:179443359;179443358;179443357 |
Novex-1 | 13830 | 41713;41714;41715 | chr2:178578632;178578631;178578630 | chr2:179443359;179443358;179443357 |
Novex-2 | 13897 | 41914;41915;41916 | chr2:178578632;178578631;178578630 | chr2:179443359;179443358;179443357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2047000667 | None | 0.997 | N | 0.664 | 0.328 | 0.423119698836 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs2047000667 | None | 0.997 | N | 0.664 | 0.328 | 0.423119698836 | gnomAD-4.0.0 | 1.86161E-06 | None | None | None | None | I | None | 1.33701E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69668E-06 | 0 | 0 |
T/S | None | None | 0.659 | N | 0.246 | 0.125 | 0.181679512989 | gnomAD-4.0.0 | 1.37035E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.53588E-05 | None | 0 | 0 | 9.0025E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1584 | likely_benign | 0.158 | benign | -0.944 | Destabilizing | 0.911 | D | 0.484 | neutral | N | 0.472343867 | None | None | I |
T/C | 0.6472 | likely_pathogenic | 0.6499 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
T/D | 0.2414 | likely_benign | 0.3065 | benign | -0.871 | Destabilizing | 0.171 | N | 0.306 | neutral | None | None | None | None | I |
T/E | 0.4916 | ambiguous | 0.5022 | ambiguous | -0.847 | Destabilizing | 0.971 | D | 0.533 | neutral | None | None | None | None | I |
T/F | 0.6072 | likely_pathogenic | 0.5719 | pathogenic | -1.06 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | I |
T/G | 0.3316 | likely_benign | 0.3136 | benign | -1.214 | Destabilizing | 0.985 | D | 0.653 | neutral | None | None | None | None | I |
T/H | 0.4216 | ambiguous | 0.4377 | ambiguous | -1.582 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | I |
T/I | 0.5587 | ambiguous | 0.5295 | ambiguous | -0.306 | Destabilizing | 0.997 | D | 0.664 | neutral | N | 0.47051707 | None | None | I |
T/K | 0.4581 | ambiguous | 0.4742 | ambiguous | -0.807 | Destabilizing | 0.985 | D | 0.586 | neutral | None | None | None | None | I |
T/L | 0.253 | likely_benign | 0.2444 | benign | -0.306 | Destabilizing | 0.993 | D | 0.593 | neutral | None | None | None | None | I |
T/M | 0.1642 | likely_benign | 0.155 | benign | 0.048 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
T/N | 0.0892 | likely_benign | 0.1103 | benign | -0.903 | Destabilizing | 0.4 | N | 0.253 | neutral | N | 0.402483924 | None | None | I |
T/P | 0.2309 | likely_benign | 0.2003 | benign | -0.488 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.464801819 | None | None | I |
T/Q | 0.414 | ambiguous | 0.4232 | ambiguous | -1.102 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | I |
T/R | 0.4198 | ambiguous | 0.4324 | ambiguous | -0.598 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
T/S | 0.1114 | likely_benign | 0.1205 | benign | -1.12 | Destabilizing | 0.659 | D | 0.246 | neutral | N | 0.448330857 | None | None | I |
T/V | 0.3888 | ambiguous | 0.3694 | ambiguous | -0.488 | Destabilizing | 0.993 | D | 0.528 | neutral | None | None | None | None | I |
T/W | 0.8132 | likely_pathogenic | 0.7993 | pathogenic | -1.007 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
T/Y | 0.4896 | ambiguous | 0.4831 | ambiguous | -0.737 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.