Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22784 | 68575;68576;68577 | chr2:178578165;178578164;178578163 | chr2:179442892;179442891;179442890 |
N2AB | 21143 | 63652;63653;63654 | chr2:178578165;178578164;178578163 | chr2:179442892;179442891;179442890 |
N2A | 20216 | 60871;60872;60873 | chr2:178578165;178578164;178578163 | chr2:179442892;179442891;179442890 |
N2B | 13719 | 41380;41381;41382 | chr2:178578165;178578164;178578163 | chr2:179442892;179442891;179442890 |
Novex-1 | 13844 | 41755;41756;41757 | chr2:178578165;178578164;178578163 | chr2:179442892;179442891;179442890 |
Novex-2 | 13911 | 41956;41957;41958 | chr2:178578165;178578164;178578163 | chr2:179442892;179442891;179442890 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1423648586 | -0.262 | 0.992 | N | 0.515 | 0.376 | 0.373173300195 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/K | rs1423648586 | -0.262 | 0.992 | N | 0.515 | 0.376 | 0.373173300195 | gnomAD-4.0.0 | 1.59477E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43476E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8431 | likely_pathogenic | 0.893 | pathogenic | -0.754 | Destabilizing | 0.996 | D | 0.581 | neutral | N | 0.488209273 | None | None | N |
E/C | 0.9916 | likely_pathogenic | 0.9935 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/D | 0.4237 | ambiguous | 0.4887 | ambiguous | -1.425 | Destabilizing | 0.275 | N | 0.212 | neutral | N | 0.479771272 | None | None | N |
E/F | 0.9951 | likely_pathogenic | 0.9969 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/G | 0.8268 | likely_pathogenic | 0.8604 | pathogenic | -1.204 | Destabilizing | 0.998 | D | 0.653 | neutral | N | 0.487412806 | None | None | N |
E/H | 0.9785 | likely_pathogenic | 0.987 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/I | 0.9786 | likely_pathogenic | 0.987 | pathogenic | 0.502 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/K | 0.9312 | likely_pathogenic | 0.9567 | pathogenic | -0.801 | Destabilizing | 0.992 | D | 0.515 | neutral | N | 0.515902643 | None | None | N |
E/L | 0.9615 | likely_pathogenic | 0.9745 | pathogenic | 0.502 | Stabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
E/M | 0.9692 | likely_pathogenic | 0.9794 | pathogenic | 1.067 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/N | 0.9229 | likely_pathogenic | 0.9471 | pathogenic | -1.403 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/P | 0.9553 | likely_pathogenic | 0.9668 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/Q | 0.7769 | likely_pathogenic | 0.8584 | pathogenic | -1.158 | Destabilizing | 0.999 | D | 0.646 | neutral | N | 0.484624421 | None | None | N |
E/R | 0.9476 | likely_pathogenic | 0.9644 | pathogenic | -0.57 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
E/S | 0.9001 | likely_pathogenic | 0.9297 | pathogenic | -1.812 | Destabilizing | 0.994 | D | 0.563 | neutral | None | None | None | None | N |
E/T | 0.9622 | likely_pathogenic | 0.9753 | pathogenic | -1.418 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/V | 0.935 | likely_pathogenic | 0.9577 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.768 | deleterious | N | 0.483133618 | None | None | N |
E/W | 0.9974 | likely_pathogenic | 0.9984 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.9872 | likely_pathogenic | 0.992 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.