Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22795 | 68608;68609;68610 | chr2:178578132;178578131;178578130 | chr2:179442859;179442858;179442857 |
N2AB | 21154 | 63685;63686;63687 | chr2:178578132;178578131;178578130 | chr2:179442859;179442858;179442857 |
N2A | 20227 | 60904;60905;60906 | chr2:178578132;178578131;178578130 | chr2:179442859;179442858;179442857 |
N2B | 13730 | 41413;41414;41415 | chr2:178578132;178578131;178578130 | chr2:179442859;179442858;179442857 |
Novex-1 | 13855 | 41788;41789;41790 | chr2:178578132;178578131;178578130 | chr2:179442859;179442858;179442857 |
Novex-2 | 13922 | 41989;41990;41991 | chr2:178578132;178578131;178578130 | chr2:179442859;179442858;179442857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1311571163 | 0.423 | 0.969 | N | 0.48 | 0.196 | 0.258779203287 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1311571163 | 0.423 | 0.969 | N | 0.48 | 0.196 | 0.258779203287 | gnomAD-4.0.0 | 1.59261E-06 | None | None | None | None | I | None | 0 | 2.28707E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5718 | likely_pathogenic | 0.4847 | ambiguous | 0.052 | Stabilizing | 0.91 | D | 0.497 | neutral | None | None | None | None | I |
K/C | 0.8334 | likely_pathogenic | 0.7952 | pathogenic | -0.34 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
K/D | 0.7332 | likely_pathogenic | 0.6983 | pathogenic | -0.233 | Destabilizing | 0.986 | D | 0.431 | neutral | None | None | None | None | I |
K/E | 0.4668 | ambiguous | 0.4062 | ambiguous | -0.25 | Destabilizing | 0.939 | D | 0.502 | neutral | N | 0.503202705 | None | None | I |
K/F | 0.931 | likely_pathogenic | 0.8975 | pathogenic | -0.298 | Destabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | I |
K/G | 0.6279 | likely_pathogenic | 0.5607 | ambiguous | -0.073 | Destabilizing | 0.953 | D | 0.389 | neutral | None | None | None | None | I |
K/H | 0.46 | ambiguous | 0.4183 | ambiguous | -0.198 | Destabilizing | 0.999 | D | 0.46 | neutral | None | None | None | None | I |
K/I | 0.6779 | likely_pathogenic | 0.6019 | pathogenic | 0.297 | Stabilizing | 0.986 | D | 0.539 | neutral | None | None | None | None | I |
K/L | 0.6315 | likely_pathogenic | 0.5747 | pathogenic | 0.297 | Stabilizing | 0.91 | D | 0.405 | neutral | None | None | None | None | I |
K/M | 0.5384 | ambiguous | 0.4741 | ambiguous | -0.018 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.491688312 | None | None | I |
K/N | 0.6525 | likely_pathogenic | 0.6117 | pathogenic | 0.126 | Stabilizing | 0.982 | D | 0.473 | neutral | N | 0.467454764 | None | None | I |
K/P | 0.6555 | likely_pathogenic | 0.6045 | pathogenic | 0.239 | Stabilizing | 0.993 | D | 0.467 | neutral | None | None | None | None | I |
K/Q | 0.2537 | likely_benign | 0.2161 | benign | -0.029 | Destabilizing | 0.991 | D | 0.519 | neutral | N | 0.474318072 | None | None | I |
K/R | 0.09 | likely_benign | 0.0837 | benign | -0.046 | Destabilizing | 0.969 | D | 0.48 | neutral | N | 0.517036007 | None | None | I |
K/S | 0.6266 | likely_pathogenic | 0.5684 | pathogenic | -0.244 | Destabilizing | 0.91 | D | 0.488 | neutral | None | None | None | None | I |
K/T | 0.3551 | ambiguous | 0.3151 | benign | -0.146 | Destabilizing | 0.17 | N | 0.359 | neutral | N | 0.498450246 | None | None | I |
K/V | 0.5903 | likely_pathogenic | 0.5106 | ambiguous | 0.239 | Stabilizing | 0.91 | D | 0.378 | neutral | None | None | None | None | I |
K/W | 0.9035 | likely_pathogenic | 0.8594 | pathogenic | -0.402 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
K/Y | 0.8282 | likely_pathogenic | 0.7766 | pathogenic | -0.044 | Destabilizing | 0.998 | D | 0.481 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.