Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22796 | 68611;68612;68613 | chr2:178578129;178578128;178578127 | chr2:179442856;179442855;179442854 |
N2AB | 21155 | 63688;63689;63690 | chr2:178578129;178578128;178578127 | chr2:179442856;179442855;179442854 |
N2A | 20228 | 60907;60908;60909 | chr2:178578129;178578128;178578127 | chr2:179442856;179442855;179442854 |
N2B | 13731 | 41416;41417;41418 | chr2:178578129;178578128;178578127 | chr2:179442856;179442855;179442854 |
Novex-1 | 13856 | 41791;41792;41793 | chr2:178578129;178578128;178578127 | chr2:179442856;179442855;179442854 |
Novex-2 | 13923 | 41992;41993;41994 | chr2:178578129;178578128;178578127 | chr2:179442856;179442855;179442854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs756135570 | 0.23 | 0.032 | N | 0.201 | 0.158 | 0.254244900254 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.91E-06 | 0 |
T/I | rs756135570 | 0.23 | 0.032 | N | 0.201 | 0.158 | 0.254244900254 | gnomAD-4.0.0 | 3.18521E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86076E-06 | 1.43332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.082 | likely_benign | 0.0859 | benign | -0.257 | Destabilizing | 0.489 | N | 0.373 | neutral | N | 0.493391143 | None | None | I |
T/C | 0.3793 | ambiguous | 0.3988 | ambiguous | -0.205 | Destabilizing | 0.998 | D | 0.43 | neutral | None | None | None | None | I |
T/D | 0.4989 | ambiguous | 0.535 | ambiguous | 0.074 | Stabilizing | 0.915 | D | 0.387 | neutral | None | None | None | None | I |
T/E | 0.4217 | ambiguous | 0.4389 | ambiguous | 0.001 | Stabilizing | 0.956 | D | 0.387 | neutral | None | None | None | None | I |
T/F | 0.2244 | likely_benign | 0.2228 | benign | -0.767 | Destabilizing | 0.956 | D | 0.499 | neutral | None | None | None | None | I |
T/G | 0.2058 | likely_benign | 0.2401 | benign | -0.379 | Destabilizing | 0.86 | D | 0.455 | neutral | None | None | None | None | I |
T/H | 0.2894 | likely_benign | 0.3006 | benign | -0.566 | Destabilizing | 0.994 | D | 0.496 | neutral | None | None | None | None | I |
T/I | 0.1349 | likely_benign | 0.1236 | benign | -0.054 | Destabilizing | 0.032 | N | 0.201 | neutral | N | 0.473498661 | None | None | I |
T/K | 0.4074 | ambiguous | 0.4144 | ambiguous | -0.335 | Destabilizing | 0.956 | D | 0.381 | neutral | None | None | None | None | I |
T/L | 0.0891 | likely_benign | 0.0884 | benign | -0.054 | Destabilizing | 0.559 | D | 0.409 | neutral | None | None | None | None | I |
T/M | 0.075 | likely_benign | 0.0712 | benign | -0.051 | Destabilizing | 0.956 | D | 0.393 | neutral | None | None | None | None | I |
T/N | 0.1018 | likely_benign | 0.1076 | benign | -0.077 | Destabilizing | 0.125 | N | 0.149 | neutral | N | 0.517518797 | None | None | I |
T/P | 0.2739 | likely_benign | 0.2918 | benign | -0.094 | Destabilizing | 0.99 | D | 0.396 | neutral | N | 0.476832379 | None | None | I |
T/Q | 0.2597 | likely_benign | 0.272 | benign | -0.276 | Destabilizing | 0.978 | D | 0.382 | neutral | None | None | None | None | I |
T/R | 0.3937 | ambiguous | 0.3938 | ambiguous | -0.029 | Destabilizing | 0.978 | D | 0.396 | neutral | None | None | None | None | I |
T/S | 0.1012 | likely_benign | 0.1062 | benign | -0.251 | Destabilizing | 0.822 | D | 0.388 | neutral | N | 0.472725082 | None | None | I |
T/V | 0.109 | likely_benign | 0.1052 | benign | -0.094 | Destabilizing | 0.019 | N | 0.147 | neutral | None | None | None | None | I |
T/W | 0.6058 | likely_pathogenic | 0.6245 | pathogenic | -0.832 | Destabilizing | 0.998 | D | 0.586 | neutral | None | None | None | None | I |
T/Y | 0.2475 | likely_benign | 0.2524 | benign | -0.533 | Destabilizing | 0.978 | D | 0.499 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.