Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22803 | 68632;68633;68634 | chr2:178578108;178578107;178578106 | chr2:179442835;179442834;179442833 |
N2AB | 21162 | 63709;63710;63711 | chr2:178578108;178578107;178578106 | chr2:179442835;179442834;179442833 |
N2A | 20235 | 60928;60929;60930 | chr2:178578108;178578107;178578106 | chr2:179442835;179442834;179442833 |
N2B | 13738 | 41437;41438;41439 | chr2:178578108;178578107;178578106 | chr2:179442835;179442834;179442833 |
Novex-1 | 13863 | 41812;41813;41814 | chr2:178578108;178578107;178578106 | chr2:179442835;179442834;179442833 |
Novex-2 | 13930 | 42013;42014;42015 | chr2:178578108;178578107;178578106 | chr2:179442835;179442834;179442833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.309 | N | 0.473 | 0.304 | 0.369867359543 | gnomAD-4.0.0 | 6.84414E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65711E-05 |
F/V | None | None | 0.684 | N | 0.493 | 0.377 | 0.617576649361 | gnomAD-4.0.0 | 2.05323E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79934E-06 | 0 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6909 | likely_pathogenic | 0.67 | pathogenic | -2.278 | Highly Destabilizing | 0.373 | N | 0.522 | neutral | None | None | None | None | I |
F/C | 0.281 | likely_benign | 0.248 | benign | -1.584 | Destabilizing | 0.003 | N | 0.438 | neutral | N | 0.502320058 | None | None | I |
F/D | 0.9438 | likely_pathogenic | 0.9379 | pathogenic | -1.72 | Destabilizing | 0.984 | D | 0.599 | neutral | None | None | None | None | I |
F/E | 0.938 | likely_pathogenic | 0.9357 | pathogenic | -1.562 | Destabilizing | 0.953 | D | 0.612 | neutral | None | None | None | None | I |
F/G | 0.8309 | likely_pathogenic | 0.8167 | pathogenic | -2.669 | Highly Destabilizing | 0.854 | D | 0.577 | neutral | None | None | None | None | I |
F/H | 0.6142 | likely_pathogenic | 0.5906 | pathogenic | -0.959 | Destabilizing | 0.91 | D | 0.553 | neutral | None | None | None | None | I |
F/I | 0.3854 | ambiguous | 0.337 | benign | -1.058 | Destabilizing | 0.684 | D | 0.435 | neutral | N | 0.467507671 | None | None | I |
F/K | 0.925 | likely_pathogenic | 0.9237 | pathogenic | -1.807 | Destabilizing | 0.953 | D | 0.617 | neutral | None | None | None | None | I |
F/L | 0.8428 | likely_pathogenic | 0.806 | pathogenic | -1.058 | Destabilizing | 0.309 | N | 0.473 | neutral | N | 0.506165652 | None | None | I |
F/M | 0.488 | ambiguous | 0.4704 | ambiguous | -0.871 | Destabilizing | 0.984 | D | 0.519 | neutral | None | None | None | None | I |
F/N | 0.8038 | likely_pathogenic | 0.78 | pathogenic | -2.145 | Highly Destabilizing | 0.953 | D | 0.609 | neutral | None | None | None | None | I |
F/P | 0.9966 | likely_pathogenic | 0.9958 | pathogenic | -1.465 | Destabilizing | 0.984 | D | 0.619 | neutral | None | None | None | None | I |
F/Q | 0.8321 | likely_pathogenic | 0.8113 | pathogenic | -2.086 | Highly Destabilizing | 0.953 | D | 0.625 | neutral | None | None | None | None | I |
F/R | 0.8549 | likely_pathogenic | 0.8546 | pathogenic | -1.29 | Destabilizing | 0.953 | D | 0.608 | neutral | None | None | None | None | I |
F/S | 0.6143 | likely_pathogenic | 0.5683 | pathogenic | -2.874 | Highly Destabilizing | 0.684 | D | 0.565 | neutral | N | 0.490513451 | None | None | I |
F/T | 0.6688 | likely_pathogenic | 0.6374 | pathogenic | -2.607 | Highly Destabilizing | 0.742 | D | 0.569 | neutral | None | None | None | None | I |
F/V | 0.3308 | likely_benign | 0.2962 | benign | -1.465 | Destabilizing | 0.684 | D | 0.493 | neutral | N | 0.515051708 | None | None | I |
F/W | 0.5831 | likely_pathogenic | 0.5594 | ambiguous | -0.138 | Destabilizing | 0.953 | D | 0.517 | neutral | None | None | None | None | I |
F/Y | 0.1496 | likely_benign | 0.1398 | benign | -0.467 | Destabilizing | 0.003 | N | 0.171 | neutral | N | 0.427760797 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.