Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22821 | 68686;68687;68688 | chr2:178578054;178578053;178578052 | chr2:179442781;179442780;179442779 |
N2AB | 21180 | 63763;63764;63765 | chr2:178578054;178578053;178578052 | chr2:179442781;179442780;179442779 |
N2A | 20253 | 60982;60983;60984 | chr2:178578054;178578053;178578052 | chr2:179442781;179442780;179442779 |
N2B | 13756 | 41491;41492;41493 | chr2:178578054;178578053;178578052 | chr2:179442781;179442780;179442779 |
Novex-1 | 13881 | 41866;41867;41868 | chr2:178578054;178578053;178578052 | chr2:179442781;179442780;179442779 |
Novex-2 | 13948 | 42067;42068;42069 | chr2:178578054;178578053;178578052 | chr2:179442781;179442780;179442779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs773379003 | -1.657 | 0.999 | N | 0.731 | 0.543 | 0.786870034503 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5742 | likely_pathogenic | 0.5713 | pathogenic | -2.452 | Highly Destabilizing | 0.985 | D | 0.566 | neutral | None | None | None | None | N |
I/C | 0.7804 | likely_pathogenic | 0.7773 | pathogenic | -1.817 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
I/D | 0.9415 | likely_pathogenic | 0.9554 | pathogenic | -2.947 | Highly Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/E | 0.7137 | likely_pathogenic | 0.7282 | pathogenic | -2.794 | Highly Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/F | 0.3596 | ambiguous | 0.3601 | ambiguous | -1.512 | Destabilizing | 0.994 | D | 0.565 | neutral | N | 0.466071256 | None | None | N |
I/G | 0.8769 | likely_pathogenic | 0.8852 | pathogenic | -2.921 | Highly Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/H | 0.8457 | likely_pathogenic | 0.8635 | pathogenic | -2.359 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/K | 0.7372 | likely_pathogenic | 0.7834 | pathogenic | -1.811 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | N |
I/L | 0.15 | likely_benign | 0.1303 | benign | -1.122 | Destabilizing | 0.061 | N | 0.209 | neutral | N | 0.427800869 | None | None | N |
I/M | 0.1084 | likely_benign | 0.1048 | benign | -1.075 | Destabilizing | 0.659 | D | 0.395 | neutral | N | 0.44800557 | None | None | N |
I/N | 0.6823 | likely_pathogenic | 0.7071 | pathogenic | -2.015 | Highly Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.473229302 | None | None | N |
I/P | 0.9924 | likely_pathogenic | 0.9934 | pathogenic | -1.545 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/Q | 0.6418 | likely_pathogenic | 0.661 | pathogenic | -1.997 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/R | 0.6874 | likely_pathogenic | 0.7384 | pathogenic | -1.405 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/S | 0.5968 | likely_pathogenic | 0.6111 | pathogenic | -2.633 | Highly Destabilizing | 0.997 | D | 0.623 | neutral | N | 0.464359102 | None | None | N |
I/T | 0.4609 | ambiguous | 0.4861 | ambiguous | -2.355 | Highly Destabilizing | 0.99 | D | 0.571 | neutral | N | 0.438327294 | None | None | N |
I/V | 0.0793 | likely_benign | 0.0792 | benign | -1.545 | Destabilizing | 0.817 | D | 0.381 | neutral | N | 0.364591966 | None | None | N |
I/W | 0.9168 | likely_pathogenic | 0.9353 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
I/Y | 0.7927 | likely_pathogenic | 0.8076 | pathogenic | -1.649 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.