Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22826 | 68701;68702;68703 | chr2:178578039;178578038;178578037 | chr2:179442766;179442765;179442764 |
N2AB | 21185 | 63778;63779;63780 | chr2:178578039;178578038;178578037 | chr2:179442766;179442765;179442764 |
N2A | 20258 | 60997;60998;60999 | chr2:178578039;178578038;178578037 | chr2:179442766;179442765;179442764 |
N2B | 13761 | 41506;41507;41508 | chr2:178578039;178578038;178578037 | chr2:179442766;179442765;179442764 |
Novex-1 | 13886 | 41881;41882;41883 | chr2:178578039;178578038;178578037 | chr2:179442766;179442765;179442764 |
Novex-2 | 13953 | 42082;42083;42084 | chr2:178578039;178578038;178578037 | chr2:179442766;179442765;179442764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1399440525 | -0.592 | 0.968 | N | 0.705 | 0.131 | 0.382087116544 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs1399440525 | -0.592 | 0.968 | N | 0.705 | 0.131 | 0.382087116544 | gnomAD-4.0.0 | 1.36889E-06 | None | None | None | None | I | None | 0 | 4.47287E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1689 | likely_benign | 0.1666 | benign | -1.337 | Destabilizing | 0.78 | D | 0.575 | neutral | N | 0.48118985 | None | None | I |
V/C | 0.7121 | likely_pathogenic | 0.6811 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
V/D | 0.6048 | likely_pathogenic | 0.6245 | pathogenic | -1.079 | Destabilizing | 0.996 | D | 0.836 | deleterious | None | None | None | None | I |
V/E | 0.4196 | ambiguous | 0.4423 | ambiguous | -1.129 | Destabilizing | 0.995 | D | 0.84 | deleterious | N | 0.486787671 | None | None | I |
V/F | 0.2298 | likely_benign | 0.2316 | benign | -1.175 | Destabilizing | 0.976 | D | 0.775 | deleterious | None | None | None | None | I |
V/G | 0.3619 | ambiguous | 0.3542 | ambiguous | -1.602 | Destabilizing | 0.995 | D | 0.825 | deleterious | N | 0.46337616 | None | None | I |
V/H | 0.7169 | likely_pathogenic | 0.7212 | pathogenic | -1.087 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
V/I | 0.0658 | likely_benign | 0.0629 | benign | -0.731 | Destabilizing | 0.034 | N | 0.279 | neutral | None | None | None | None | I |
V/K | 0.5344 | ambiguous | 0.549 | ambiguous | -1.053 | Destabilizing | 0.988 | D | 0.829 | deleterious | None | None | None | None | I |
V/L | 0.1974 | likely_benign | 0.1826 | benign | -0.731 | Destabilizing | 0.011 | N | 0.297 | neutral | N | 0.425277852 | None | None | I |
V/M | 0.1408 | likely_benign | 0.1378 | benign | -0.495 | Destabilizing | 0.968 | D | 0.705 | prob.neutral | N | 0.495620585 | None | None | I |
V/N | 0.3973 | ambiguous | 0.3845 | ambiguous | -0.734 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | I |
V/P | 0.4658 | ambiguous | 0.417 | ambiguous | -0.898 | Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | I |
V/Q | 0.449 | ambiguous | 0.4596 | ambiguous | -0.981 | Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | I |
V/R | 0.5027 | ambiguous | 0.5191 | ambiguous | -0.457 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | I |
V/S | 0.2708 | likely_benign | 0.2656 | benign | -1.217 | Destabilizing | 0.988 | D | 0.815 | deleterious | None | None | None | None | I |
V/T | 0.14 | likely_benign | 0.1366 | benign | -1.164 | Destabilizing | 0.919 | D | 0.61 | neutral | None | None | None | None | I |
V/W | 0.8493 | likely_pathogenic | 0.8518 | pathogenic | -1.282 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
V/Y | 0.6517 | likely_pathogenic | 0.6429 | pathogenic | -1.018 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.