Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22831 | 68716;68717;68718 | chr2:178578024;178578023;178578022 | chr2:179442751;179442750;179442749 |
N2AB | 21190 | 63793;63794;63795 | chr2:178578024;178578023;178578022 | chr2:179442751;179442750;179442749 |
N2A | 20263 | 61012;61013;61014 | chr2:178578024;178578023;178578022 | chr2:179442751;179442750;179442749 |
N2B | 13766 | 41521;41522;41523 | chr2:178578024;178578023;178578022 | chr2:179442751;179442750;179442749 |
Novex-1 | 13891 | 41896;41897;41898 | chr2:178578024;178578023;178578022 | chr2:179442751;179442750;179442749 |
Novex-2 | 13958 | 42097;42098;42099 | chr2:178578024;178578023;178578022 | chr2:179442751;179442750;179442749 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.006 | N | 0.461 | 0.168 | 0.408444019923 | gnomAD-4.0.0 | 6.37048E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14419E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1264 | likely_benign | 0.1239 | benign | -0.807 | Destabilizing | 0.505 | D | 0.527 | neutral | None | None | None | None | I |
L/C | 0.4222 | ambiguous | 0.4079 | ambiguous | -0.686 | Destabilizing | 0.995 | D | 0.594 | neutral | None | None | None | None | I |
L/D | 0.4727 | ambiguous | 0.4759 | ambiguous | -0.201 | Destabilizing | 0.946 | D | 0.649 | prob.neutral | None | None | None | None | I |
L/E | 0.2386 | likely_benign | 0.2325 | benign | -0.277 | Destabilizing | 0.712 | D | 0.603 | neutral | None | None | None | None | I |
L/F | 0.1134 | likely_benign | 0.1074 | benign | -0.695 | Destabilizing | 0.982 | D | 0.563 | neutral | None | None | None | None | I |
L/G | 0.3231 | likely_benign | 0.3113 | benign | -0.997 | Destabilizing | 0.712 | D | 0.625 | neutral | None | None | None | None | I |
L/H | 0.1619 | likely_benign | 0.1522 | benign | -0.182 | Destabilizing | 0.995 | D | 0.625 | neutral | None | None | None | None | I |
L/I | 0.084 | likely_benign | 0.0857 | benign | -0.418 | Destabilizing | 0.791 | D | 0.466 | neutral | N | 0.473743803 | None | None | I |
L/K | 0.1655 | likely_benign | 0.1604 | benign | -0.473 | Destabilizing | 0.032 | N | 0.377 | neutral | None | None | None | None | I |
L/M | 0.0944 | likely_benign | 0.0892 | benign | -0.45 | Destabilizing | 0.982 | D | 0.575 | neutral | None | None | None | None | I |
L/N | 0.2103 | likely_benign | 0.2143 | benign | -0.274 | Destabilizing | 0.946 | D | 0.654 | prob.neutral | None | None | None | None | I |
L/P | 0.107 | likely_benign | 0.1128 | benign | -0.514 | Destabilizing | 0.006 | N | 0.461 | neutral | N | 0.402880995 | None | None | I |
L/Q | 0.0997 | likely_benign | 0.0917 | benign | -0.488 | Destabilizing | 0.868 | D | 0.634 | neutral | N | 0.452963099 | None | None | I |
L/R | 0.1609 | likely_benign | 0.1485 | benign | 0.113 | Stabilizing | 0.002 | N | 0.345 | neutral | N | 0.447999996 | None | None | I |
L/S | 0.1356 | likely_benign | 0.1358 | benign | -0.776 | Destabilizing | 0.712 | D | 0.578 | neutral | None | None | None | None | I |
L/T | 0.1399 | likely_benign | 0.1369 | benign | -0.74 | Destabilizing | 0.834 | D | 0.531 | neutral | None | None | None | None | I |
L/V | 0.0785 | likely_benign | 0.0766 | benign | -0.514 | Destabilizing | 0.791 | D | 0.413 | neutral | N | 0.46279609 | None | None | I |
L/W | 0.2516 | likely_benign | 0.2388 | benign | -0.696 | Destabilizing | 0.995 | D | 0.657 | prob.neutral | None | None | None | None | I |
L/Y | 0.2471 | likely_benign | 0.2377 | benign | -0.466 | Destabilizing | 0.982 | D | 0.624 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.