Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22833 | 68722;68723;68724 | chr2:178578018;178578017;178578016 | chr2:179442745;179442744;179442743 |
N2AB | 21192 | 63799;63800;63801 | chr2:178578018;178578017;178578016 | chr2:179442745;179442744;179442743 |
N2A | 20265 | 61018;61019;61020 | chr2:178578018;178578017;178578016 | chr2:179442745;179442744;179442743 |
N2B | 13768 | 41527;41528;41529 | chr2:178578018;178578017;178578016 | chr2:179442745;179442744;179442743 |
Novex-1 | 13893 | 41902;41903;41904 | chr2:178578018;178578017;178578016 | chr2:179442745;179442744;179442743 |
Novex-2 | 13960 | 42103;42104;42105 | chr2:178578018;178578017;178578016 | chr2:179442745;179442744;179442743 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs876658077 | None | 0.666 | N | 0.55 | 0.432 | 0.43656330218 | gnomAD-4.0.0 | 1.59274E-06 | None | None | None | None | I | None | 5.66765E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2372 | likely_benign | 0.2193 | benign | -0.633 | Destabilizing | 0.451 | N | 0.467 | neutral | N | 0.489429679 | None | None | I |
S/C | 0.2002 | likely_benign | 0.1767 | benign | -0.477 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | I |
S/D | 0.9761 | likely_pathogenic | 0.9744 | pathogenic | -1.046 | Destabilizing | 0.841 | D | 0.401 | neutral | None | None | None | None | I |
S/E | 0.9882 | likely_pathogenic | 0.9868 | pathogenic | -0.891 | Destabilizing | 0.841 | D | 0.367 | neutral | None | None | None | None | I |
S/F | 0.9565 | likely_pathogenic | 0.9485 | pathogenic | -0.329 | Destabilizing | 0.974 | D | 0.758 | deleterious | None | None | None | None | I |
S/G | 0.2557 | likely_benign | 0.253 | benign | -1.029 | Destabilizing | 0.841 | D | 0.417 | neutral | None | None | None | None | I |
S/H | 0.9719 | likely_pathogenic | 0.9704 | pathogenic | -1.441 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | I |
S/I | 0.8607 | likely_pathogenic | 0.8367 | pathogenic | 0.361 | Stabilizing | 0.949 | D | 0.536 | neutral | None | None | None | None | I |
S/K | 0.9968 | likely_pathogenic | 0.9965 | pathogenic | -0.575 | Destabilizing | 0.841 | D | 0.394 | neutral | None | None | None | None | I |
S/L | 0.5468 | ambiguous | 0.5038 | ambiguous | 0.361 | Stabilizing | 0.666 | D | 0.55 | neutral | N | 0.508228269 | None | None | I |
S/M | 0.6857 | likely_pathogenic | 0.6409 | pathogenic | 0.296 | Stabilizing | 0.998 | D | 0.586 | neutral | None | None | None | None | I |
S/N | 0.8592 | likely_pathogenic | 0.8559 | pathogenic | -1.046 | Destabilizing | 0.841 | D | 0.451 | neutral | None | None | None | None | I |
S/P | 0.9747 | likely_pathogenic | 0.9706 | pathogenic | 0.067 | Stabilizing | 0.966 | D | 0.531 | neutral | N | 0.505029173 | None | None | I |
S/Q | 0.9816 | likely_pathogenic | 0.9794 | pathogenic | -0.832 | Destabilizing | 0.974 | D | 0.503 | neutral | None | None | None | None | I |
S/R | 0.9938 | likely_pathogenic | 0.9933 | pathogenic | -0.882 | Destabilizing | 0.974 | D | 0.544 | neutral | None | None | None | None | I |
S/T | 0.1064 | likely_benign | 0.096 | benign | -0.769 | Destabilizing | 0.007 | N | 0.152 | neutral | N | 0.487038387 | None | None | I |
S/V | 0.687 | likely_pathogenic | 0.6368 | pathogenic | 0.067 | Stabilizing | 0.725 | D | 0.52 | neutral | None | None | None | None | I |
S/W | 0.9777 | likely_pathogenic | 0.9778 | pathogenic | -0.577 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | I |
S/Y | 0.9601 | likely_pathogenic | 0.958 | pathogenic | -0.171 | Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.