Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22834 | 68725;68726;68727 | chr2:178578015;178578014;178578013 | chr2:179442742;179442741;179442740 |
N2AB | 21193 | 63802;63803;63804 | chr2:178578015;178578014;178578013 | chr2:179442742;179442741;179442740 |
N2A | 20266 | 61021;61022;61023 | chr2:178578015;178578014;178578013 | chr2:179442742;179442741;179442740 |
N2B | 13769 | 41530;41531;41532 | chr2:178578015;178578014;178578013 | chr2:179442742;179442741;179442740 |
Novex-1 | 13894 | 41905;41906;41907 | chr2:178578015;178578014;178578013 | chr2:179442742;179442741;179442740 |
Novex-2 | 13961 | 42106;42107;42108 | chr2:178578015;178578014;178578013 | chr2:179442742;179442741;179442740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs557161476 | 0.385 | 0.999 | N | 0.618 | 0.188 | 0.222439326576 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93274E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs557161476 | 0.385 | 0.999 | N | 0.618 | 0.188 | 0.222439326576 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/Q | rs557161476 | 0.385 | 0.999 | N | 0.618 | 0.188 | 0.222439326576 | gnomAD-4.0.0 | 2.56394E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 4.86642E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1482 | likely_benign | 0.1546 | benign | -0.111 | Destabilizing | 0.996 | D | 0.612 | neutral | N | 0.484691515 | None | None | I |
E/C | 0.8091 | likely_pathogenic | 0.8113 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | None | None | None | None | I |
E/D | 0.0943 | likely_benign | 0.0967 | benign | -0.243 | Destabilizing | 0.996 | D | 0.473 | neutral | N | 0.438420508 | None | None | I |
E/F | 0.6897 | likely_pathogenic | 0.6971 | pathogenic | -0.066 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/G | 0.1731 | likely_benign | 0.1767 | benign | -0.246 | Destabilizing | 0.999 | D | 0.467 | neutral | N | 0.466009506 | None | None | I |
E/H | 0.4387 | ambiguous | 0.4529 | ambiguous | 0.545 | Stabilizing | 0.522 | D | 0.501 | neutral | None | None | None | None | I |
E/I | 0.297 | likely_benign | 0.2948 | benign | 0.194 | Stabilizing | 1.0 | D | 0.695 | prob.delet. | None | None | None | None | I |
E/K | 0.1202 | likely_benign | 0.1198 | benign | 0.34 | Stabilizing | 0.996 | D | 0.525 | neutral | N | 0.509088527 | None | None | I |
E/L | 0.3235 | likely_benign | 0.3308 | benign | 0.194 | Stabilizing | 0.999 | D | 0.651 | prob.neutral | None | None | None | None | I |
E/M | 0.4012 | ambiguous | 0.3952 | ambiguous | -0.022 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
E/N | 0.2071 | likely_benign | 0.2087 | benign | 0.071 | Stabilizing | 0.998 | D | 0.646 | neutral | None | None | None | None | I |
E/P | 0.3318 | likely_benign | 0.347 | ambiguous | 0.111 | Stabilizing | 1.0 | D | 0.659 | prob.neutral | None | None | None | None | I |
E/Q | 0.1319 | likely_benign | 0.1322 | benign | 0.095 | Stabilizing | 0.999 | D | 0.618 | neutral | N | 0.507125658 | None | None | I |
E/R | 0.2322 | likely_benign | 0.2455 | benign | 0.634 | Stabilizing | 0.999 | D | 0.67 | prob.neutral | None | None | None | None | I |
E/S | 0.1788 | likely_benign | 0.1796 | benign | -0.092 | Destabilizing | 0.997 | D | 0.595 | neutral | None | None | None | None | I |
E/T | 0.2109 | likely_benign | 0.2102 | benign | 0.027 | Stabilizing | 1.0 | D | 0.657 | prob.neutral | None | None | None | None | I |
E/V | 0.1879 | likely_benign | 0.1881 | benign | 0.111 | Stabilizing | 1.0 | D | 0.615 | neutral | N | 0.471223292 | None | None | I |
E/W | 0.8767 | likely_pathogenic | 0.8871 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.703 | prob.delet. | None | None | None | None | I |
E/Y | 0.5375 | ambiguous | 0.556 | ambiguous | 0.164 | Stabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.