Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2283468725;68726;68727 chr2:178578015;178578014;178578013chr2:179442742;179442741;179442740
N2AB2119363802;63803;63804 chr2:178578015;178578014;178578013chr2:179442742;179442741;179442740
N2A2026661021;61022;61023 chr2:178578015;178578014;178578013chr2:179442742;179442741;179442740
N2B1376941530;41531;41532 chr2:178578015;178578014;178578013chr2:179442742;179442741;179442740
Novex-11389441905;41906;41907 chr2:178578015;178578014;178578013chr2:179442742;179442741;179442740
Novex-21396142106;42107;42108 chr2:178578015;178578014;178578013chr2:179442742;179442741;179442740
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Fn3-53
  • Domain position: 92
  • Structural Position: 125
  • Q(SASA): 0.7474
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/Q rs557161476 0.385 0.999 N 0.618 0.188 0.222439326576 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 1.93274E-04 None 0 0 0 0 0
E/Q rs557161476 0.385 0.999 N 0.618 0.188 0.222439326576 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 1E-03 0 None None None 0 None
E/Q rs557161476 0.385 0.999 N 0.618 0.188 0.222439326576 gnomAD-4.0.0 2.56394E-06 None None None None I None 0 0 None 0 4.86642E-05 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1482 likely_benign 0.1546 benign -0.111 Destabilizing 0.996 D 0.612 neutral N 0.484691515 None None I
E/C 0.8091 likely_pathogenic 0.8113 pathogenic -0.251 Destabilizing 1.0 D 0.703 prob.delet. None None None None I
E/D 0.0943 likely_benign 0.0967 benign -0.243 Destabilizing 0.996 D 0.473 neutral N 0.438420508 None None I
E/F 0.6897 likely_pathogenic 0.6971 pathogenic -0.066 Destabilizing 0.999 D 0.681 prob.neutral None None None None I
E/G 0.1731 likely_benign 0.1767 benign -0.246 Destabilizing 0.999 D 0.467 neutral N 0.466009506 None None I
E/H 0.4387 ambiguous 0.4529 ambiguous 0.545 Stabilizing 0.522 D 0.501 neutral None None None None I
E/I 0.297 likely_benign 0.2948 benign 0.194 Stabilizing 1.0 D 0.695 prob.delet. None None None None I
E/K 0.1202 likely_benign 0.1198 benign 0.34 Stabilizing 0.996 D 0.525 neutral N 0.509088527 None None I
E/L 0.3235 likely_benign 0.3308 benign 0.194 Stabilizing 0.999 D 0.651 prob.neutral None None None None I
E/M 0.4012 ambiguous 0.3952 ambiguous -0.022 Destabilizing 1.0 D 0.613 neutral None None None None I
E/N 0.2071 likely_benign 0.2087 benign 0.071 Stabilizing 0.998 D 0.646 neutral None None None None I
E/P 0.3318 likely_benign 0.347 ambiguous 0.111 Stabilizing 1.0 D 0.659 prob.neutral None None None None I
E/Q 0.1319 likely_benign 0.1322 benign 0.095 Stabilizing 0.999 D 0.618 neutral N 0.507125658 None None I
E/R 0.2322 likely_benign 0.2455 benign 0.634 Stabilizing 0.999 D 0.67 prob.neutral None None None None I
E/S 0.1788 likely_benign 0.1796 benign -0.092 Destabilizing 0.997 D 0.595 neutral None None None None I
E/T 0.2109 likely_benign 0.2102 benign 0.027 Stabilizing 1.0 D 0.657 prob.neutral None None None None I
E/V 0.1879 likely_benign 0.1881 benign 0.111 Stabilizing 1.0 D 0.615 neutral N 0.471223292 None None I
E/W 0.8767 likely_pathogenic 0.8871 pathogenic 0.017 Stabilizing 1.0 D 0.703 prob.delet. None None None None I
E/Y 0.5375 ambiguous 0.556 ambiguous 0.164 Stabilizing 0.998 D 0.605 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.