Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22837 | 68734;68735;68736 | chr2:178578006;178578005;178578004 | chr2:179442733;179442732;179442731 |
N2AB | 21196 | 63811;63812;63813 | chr2:178578006;178578005;178578004 | chr2:179442733;179442732;179442731 |
N2A | 20269 | 61030;61031;61032 | chr2:178578006;178578005;178578004 | chr2:179442733;179442732;179442731 |
N2B | 13772 | 41539;41540;41541 | chr2:178578006;178578005;178578004 | chr2:179442733;179442732;179442731 |
Novex-1 | 13897 | 41914;41915;41916 | chr2:178578006;178578005;178578004 | chr2:179442733;179442732;179442731 |
Novex-2 | 13964 | 42115;42116;42117 | chr2:178578006;178578005;178578004 | chr2:179442733;179442732;179442731 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.944 | N | 0.459 | 0.115 | 0.380223377699 | gnomAD-4.0.0 | 4.77934E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58305E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2702 | likely_benign | 0.2474 | benign | -0.903 | Destabilizing | 0.944 | D | 0.457 | neutral | N | 0.506221581 | None | None | I |
V/C | 0.8018 | likely_pathogenic | 0.7769 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.72 | deleterious | None | None | None | None | I |
V/D | 0.7577 | likely_pathogenic | 0.7282 | pathogenic | -0.439 | Destabilizing | 0.997 | D | 0.799 | deleterious | None | None | None | None | I |
V/E | 0.6034 | likely_pathogenic | 0.5853 | pathogenic | -0.485 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | N | 0.519132163 | None | None | I |
V/F | 0.2123 | likely_benign | 0.1827 | benign | -0.729 | Destabilizing | 0.999 | D | 0.673 | prob.neutral | None | None | None | None | I |
V/G | 0.4679 | ambiguous | 0.4111 | ambiguous | -1.143 | Destabilizing | 0.997 | D | 0.638 | neutral | N | 0.489798527 | None | None | I |
V/H | 0.7645 | likely_pathogenic | 0.7292 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
V/I | 0.0804 | likely_benign | 0.0767 | benign | -0.384 | Destabilizing | 0.957 | D | 0.521 | neutral | None | None | None | None | I |
V/K | 0.5591 | ambiguous | 0.5347 | ambiguous | -0.774 | Destabilizing | 0.997 | D | 0.727 | deleterious | None | None | None | None | I |
V/L | 0.2092 | likely_benign | 0.1877 | benign | -0.384 | Destabilizing | 0.944 | D | 0.459 | neutral | N | 0.470703498 | None | None | I |
V/M | 0.1602 | likely_benign | 0.1388 | benign | -0.413 | Destabilizing | 0.999 | D | 0.67 | prob.neutral | N | 0.511147398 | None | None | I |
V/N | 0.5558 | ambiguous | 0.4933 | ambiguous | -0.602 | Destabilizing | 0.997 | D | 0.789 | deleterious | None | None | None | None | I |
V/P | 0.5958 | likely_pathogenic | 0.5598 | ambiguous | -0.52 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
V/Q | 0.5242 | ambiguous | 0.4943 | ambiguous | -0.779 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
V/R | 0.4741 | ambiguous | 0.4656 | ambiguous | -0.254 | Destabilizing | 0.997 | D | 0.833 | deleterious | None | None | None | None | I |
V/S | 0.4107 | ambiguous | 0.3617 | ambiguous | -1.092 | Destabilizing | 0.99 | D | 0.526 | neutral | None | None | None | None | I |
V/T | 0.2176 | likely_benign | 0.2004 | benign | -1.027 | Destabilizing | 0.422 | N | 0.307 | neutral | None | None | None | None | I |
V/W | 0.8631 | likely_pathogenic | 0.8418 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
V/Y | 0.6528 | likely_pathogenic | 0.6243 | pathogenic | -0.555 | Destabilizing | 0.999 | D | 0.697 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.