Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22839 | 68740;68741;68742 | chr2:178578000;178577999;178577998 | chr2:179442727;179442726;179442725 |
N2AB | 21198 | 63817;63818;63819 | chr2:178578000;178577999;178577998 | chr2:179442727;179442726;179442725 |
N2A | 20271 | 61036;61037;61038 | chr2:178578000;178577999;178577998 | chr2:179442727;179442726;179442725 |
N2B | 13774 | 41545;41546;41547 | chr2:178578000;178577999;178577998 | chr2:179442727;179442726;179442725 |
Novex-1 | 13899 | 41920;41921;41922 | chr2:178578000;178577999;178577998 | chr2:179442727;179442726;179442725 |
Novex-2 | 13966 | 42121;42122;42123 | chr2:178578000;178577999;178577998 | chr2:179442727;179442726;179442725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.736 | 0.526 | 0.794652452828 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | None | None | 0.997 | N | 0.569 | 0.183 | 0.467329424371 | gnomAD-4.0.0 | 1.5935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86138E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4995 | ambiguous | 0.5782 | pathogenic | -1.585 | Destabilizing | 0.998 | D | 0.73 | deleterious | None | None | None | None | N |
L/C | 0.6443 | likely_pathogenic | 0.7075 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/D | 0.964 | likely_pathogenic | 0.9756 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
L/E | 0.7117 | likely_pathogenic | 0.7732 | pathogenic | -1.209 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
L/F | 0.3305 | likely_benign | 0.369 | ambiguous | -1.301 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/G | 0.8537 | likely_pathogenic | 0.8965 | pathogenic | -1.861 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
L/H | 0.5162 | ambiguous | 0.5878 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
L/I | 0.1537 | likely_benign | 0.1524 | benign | -0.922 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
L/K | 0.3964 | ambiguous | 0.454 | ambiguous | -0.986 | Destabilizing | 0.999 | D | 0.724 | deleterious | None | None | None | None | N |
L/M | 0.1533 | likely_benign | 0.1585 | benign | -0.621 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | D | 0.525205278 | None | None | N |
L/N | 0.8011 | likely_pathogenic | 0.8481 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.738 | deleterious | None | None | None | None | N |
L/P | 0.9716 | likely_pathogenic | 0.9831 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.736 | deleterious | N | 0.474027096 | None | None | N |
L/Q | 0.2781 | likely_benign | 0.3327 | benign | -1.024 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.48618553 | None | None | N |
L/R | 0.2553 | likely_benign | 0.3023 | benign | -0.328 | Destabilizing | 0.999 | D | 0.742 | deleterious | N | 0.452438316 | None | None | N |
L/S | 0.6515 | likely_pathogenic | 0.7219 | pathogenic | -1.316 | Destabilizing | 0.999 | D | 0.736 | deleterious | None | None | None | None | N |
L/T | 0.4535 | ambiguous | 0.5025 | ambiguous | -1.248 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/V | 0.1379 | likely_benign | 0.1397 | benign | -1.111 | Destabilizing | 0.997 | D | 0.569 | neutral | N | 0.48664689 | None | None | N |
L/W | 0.5444 | ambiguous | 0.6039 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/Y | 0.673 | likely_pathogenic | 0.7235 | pathogenic | -1.106 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.