Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2284 | 7075;7076;7077 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
N2AB | 2284 | 7075;7076;7077 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
N2A | 2284 | 7075;7076;7077 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
N2B | 2238 | 6937;6938;6939 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
Novex-1 | 2238 | 6937;6938;6939 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
Novex-2 | 2238 | 6937;6938;6939 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
Novex-3 | 2284 | 7075;7076;7077 | chr2:178774414;178774413;178774412 | chr2:179639141;179639140;179639139 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs751111175 | -0.492 | 0.604 | N | 0.516 | 0.247 | 0.0666544352282 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.76E-05 | 1.63506E-04 |
G/A | rs751111175 | -0.492 | 0.604 | N | 0.516 | 0.247 | 0.0666544352282 | gnomAD-4.0.0 | 3.42106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49682E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1218 | likely_benign | 0.1019 | benign | -0.474 | Destabilizing | 0.604 | D | 0.516 | neutral | N | 0.308711046 | None | None | N |
G/C | 0.5698 | likely_pathogenic | 0.4781 | ambiguous | -0.932 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
G/D | 0.9876 | likely_pathogenic | 0.9822 | pathogenic | -0.671 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
G/E | 0.9822 | likely_pathogenic | 0.9729 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.869 | deleterious | N | 0.447397429 | None | None | N |
G/F | 0.9686 | likely_pathogenic | 0.9523 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
G/H | 0.9903 | likely_pathogenic | 0.9843 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/I | 0.7861 | likely_pathogenic | 0.703 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
G/K | 0.9903 | likely_pathogenic | 0.986 | pathogenic | -1.031 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
G/L | 0.8689 | likely_pathogenic | 0.8127 | pathogenic | 0.119 | Stabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
G/M | 0.911 | likely_pathogenic | 0.8623 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
G/N | 0.9784 | likely_pathogenic | 0.9688 | pathogenic | -0.864 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
G/P | 0.996 | likely_pathogenic | 0.9948 | pathogenic | -0.033 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
G/Q | 0.9791 | likely_pathogenic | 0.9682 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
G/R | 0.9736 | likely_pathogenic | 0.961 | pathogenic | -0.925 | Destabilizing | 0.999 | D | 0.888 | deleterious | N | 0.447397429 | None | None | N |
G/S | 0.378 | ambiguous | 0.3113 | benign | -1.231 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/T | 0.5973 | likely_pathogenic | 0.5056 | ambiguous | -1.104 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
G/V | 0.5924 | likely_pathogenic | 0.4866 | ambiguous | -0.033 | Destabilizing | 0.997 | D | 0.866 | deleterious | N | 0.388130562 | None | None | N |
G/W | 0.982 | likely_pathogenic | 0.9706 | pathogenic | -1.123 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
G/Y | 0.9802 | likely_pathogenic | 0.9669 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.