Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22847 | 68764;68765;68766 | chr2:178577887;178577886;178577885 | chr2:179442614;179442613;179442612 |
N2AB | 21206 | 63841;63842;63843 | chr2:178577887;178577886;178577885 | chr2:179442614;179442613;179442612 |
N2A | 20279 | 61060;61061;61062 | chr2:178577887;178577886;178577885 | chr2:179442614;179442613;179442612 |
N2B | 13782 | 41569;41570;41571 | chr2:178577887;178577886;178577885 | chr2:179442614;179442613;179442612 |
Novex-1 | 13907 | 41944;41945;41946 | chr2:178577887;178577886;178577885 | chr2:179442614;179442613;179442612 |
Novex-2 | 13974 | 42145;42146;42147 | chr2:178577887;178577886;178577885 | chr2:179442614;179442613;179442612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1051353080 | None | 0.983 | N | 0.64 | 0.164 | 0.163833314356 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5692 | likely_pathogenic | 0.5974 | pathogenic | -0.306 | Destabilizing | 0.916 | D | 0.561 | neutral | None | None | None | None | N |
K/C | 0.7458 | likely_pathogenic | 0.7604 | pathogenic | -0.377 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
K/D | 0.8618 | likely_pathogenic | 0.8758 | pathogenic | 0.075 | Stabilizing | 0.987 | D | 0.669 | neutral | None | None | None | None | N |
K/E | 0.3636 | ambiguous | 0.3765 | ambiguous | 0.106 | Stabilizing | 0.892 | D | 0.514 | neutral | D | 0.52303926 | None | None | N |
K/F | 0.8593 | likely_pathogenic | 0.875 | pathogenic | -0.384 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/G | 0.7973 | likely_pathogenic | 0.8028 | pathogenic | -0.568 | Destabilizing | 0.975 | D | 0.618 | neutral | None | None | None | None | N |
K/H | 0.4463 | ambiguous | 0.4602 | ambiguous | -0.949 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
K/I | 0.4609 | ambiguous | 0.498 | ambiguous | 0.323 | Stabilizing | 0.983 | D | 0.745 | deleterious | N | 0.480243101 | None | None | N |
K/L | 0.4843 | ambiguous | 0.5122 | ambiguous | 0.323 | Stabilizing | 0.975 | D | 0.609 | neutral | None | None | None | None | N |
K/M | 0.2882 | likely_benign | 0.3172 | benign | 0.31 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
K/N | 0.6499 | likely_pathogenic | 0.653 | pathogenic | 0.031 | Stabilizing | 0.983 | D | 0.64 | neutral | N | 0.488478395 | None | None | N |
K/P | 0.7213 | likely_pathogenic | 0.7367 | pathogenic | 0.143 | Stabilizing | 0.033 | N | 0.349 | neutral | None | None | None | None | N |
K/Q | 0.197 | likely_benign | 0.203 | benign | -0.21 | Destabilizing | 0.983 | D | 0.638 | neutral | N | 0.495025939 | None | None | N |
K/R | 0.1037 | likely_benign | 0.1024 | benign | -0.222 | Destabilizing | 0.944 | D | 0.566 | neutral | N | 0.452909958 | None | None | N |
K/S | 0.667 | likely_pathogenic | 0.6783 | pathogenic | -0.607 | Destabilizing | 0.916 | D | 0.575 | neutral | None | None | None | None | N |
K/T | 0.2786 | likely_benign | 0.294 | benign | -0.404 | Destabilizing | 0.967 | D | 0.662 | neutral | N | 0.480635277 | None | None | N |
K/V | 0.452 | ambiguous | 0.486 | ambiguous | 0.143 | Stabilizing | 0.987 | D | 0.659 | neutral | None | None | None | None | N |
K/W | 0.8829 | likely_pathogenic | 0.9004 | pathogenic | -0.262 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
K/Y | 0.7477 | likely_pathogenic | 0.7756 | pathogenic | 0.069 | Stabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.