Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22849 | 68770;68771;68772 | chr2:178577881;178577880;178577879 | chr2:179442608;179442607;179442606 |
N2AB | 21208 | 63847;63848;63849 | chr2:178577881;178577880;178577879 | chr2:179442608;179442607;179442606 |
N2A | 20281 | 61066;61067;61068 | chr2:178577881;178577880;178577879 | chr2:179442608;179442607;179442606 |
N2B | 13784 | 41575;41576;41577 | chr2:178577881;178577880;178577879 | chr2:179442608;179442607;179442606 |
Novex-1 | 13909 | 41950;41951;41952 | chr2:178577881;178577880;178577879 | chr2:179442608;179442607;179442606 |
Novex-2 | 13976 | 42151;42152;42153 | chr2:178577881;178577880;178577879 | chr2:179442608;179442607;179442606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.014 | N | 0.203 | 0.156 | 0.232513804876 | gnomAD-4.0.0 | 1.3967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.10584E-07 | 1.23864E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2011 | likely_benign | 0.1959 | benign | -0.467 | Destabilizing | 0.698 | D | 0.593 | neutral | N | 0.483623689 | None | None | N |
E/C | 0.8474 | likely_pathogenic | 0.8535 | pathogenic | -0.458 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
E/D | 0.1587 | likely_benign | 0.1669 | benign | -0.733 | Destabilizing | 0.006 | N | 0.127 | neutral | D | 0.524618127 | None | None | N |
E/F | 0.7986 | likely_pathogenic | 0.7973 | pathogenic | 0.136 | Stabilizing | 0.993 | D | 0.77 | deleterious | None | None | None | None | N |
E/G | 0.3321 | likely_benign | 0.3317 | benign | -0.778 | Destabilizing | 0.822 | D | 0.635 | neutral | N | 0.505615512 | None | None | N |
E/H | 0.4617 | ambiguous | 0.4696 | ambiguous | 0.213 | Stabilizing | 0.978 | D | 0.589 | neutral | None | None | None | None | N |
E/I | 0.3307 | likely_benign | 0.3225 | benign | 0.362 | Stabilizing | 0.978 | D | 0.773 | deleterious | None | None | None | None | N |
E/K | 0.1619 | likely_benign | 0.1541 | benign | -0.262 | Destabilizing | 0.014 | N | 0.203 | neutral | N | 0.494985867 | None | None | N |
E/L | 0.4476 | ambiguous | 0.4344 | ambiguous | 0.362 | Stabilizing | 0.956 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/M | 0.4554 | ambiguous | 0.4501 | ambiguous | 0.378 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/N | 0.2691 | likely_benign | 0.2781 | benign | -0.792 | Destabilizing | 0.86 | D | 0.531 | neutral | None | None | None | None | N |
E/P | 0.9548 | likely_pathogenic | 0.9492 | pathogenic | 0.107 | Stabilizing | 0.978 | D | 0.665 | neutral | None | None | None | None | N |
E/Q | 0.1419 | likely_benign | 0.1395 | benign | -0.661 | Destabilizing | 0.822 | D | 0.557 | neutral | N | 0.519460237 | None | None | N |
E/R | 0.2658 | likely_benign | 0.2612 | benign | 0.143 | Stabilizing | 0.754 | D | 0.541 | neutral | None | None | None | None | N |
E/S | 0.2407 | likely_benign | 0.246 | benign | -1.001 | Destabilizing | 0.86 | D | 0.533 | neutral | None | None | None | None | N |
E/T | 0.2234 | likely_benign | 0.2269 | benign | -0.742 | Destabilizing | 0.86 | D | 0.625 | neutral | None | None | None | None | N |
E/V | 0.1931 | likely_benign | 0.1861 | benign | 0.107 | Stabilizing | 0.942 | D | 0.672 | neutral | D | 0.523193975 | None | None | N |
E/W | 0.9248 | likely_pathogenic | 0.9254 | pathogenic | 0.369 | Stabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
E/Y | 0.6926 | likely_pathogenic | 0.6901 | pathogenic | 0.379 | Stabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.