Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2285 | 7078;7079;7080 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
N2AB | 2285 | 7078;7079;7080 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
N2A | 2285 | 7078;7079;7080 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
N2B | 2239 | 6940;6941;6942 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
Novex-1 | 2239 | 6940;6941;6942 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
Novex-2 | 2239 | 6940;6941;6942 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
Novex-3 | 2285 | 7078;7079;7080 | chr2:178774411;178774410;178774409 | chr2:179639138;179639137;179639136 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2091955390 | None | 0.999 | N | 0.522 | 0.203 | 0.0986583533028 | gnomAD-4.0.0 | 6.84193E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99368E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2864 | likely_benign | 0.2609 | benign | -0.555 | Destabilizing | 0.999 | D | 0.674 | neutral | N | 0.451171286 | None | None | N |
E/C | 0.9251 | likely_pathogenic | 0.9202 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/D | 0.1836 | likely_benign | 0.1713 | benign | -0.592 | Destabilizing | 0.999 | D | 0.522 | neutral | N | 0.453177417 | None | None | N |
E/F | 0.8065 | likely_pathogenic | 0.7916 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/G | 0.4236 | ambiguous | 0.38 | ambiguous | -0.816 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.445980807 | None | None | N |
E/H | 0.6294 | likely_pathogenic | 0.5916 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/I | 0.3394 | likely_benign | 0.3307 | benign | 0.12 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
E/K | 0.2954 | likely_benign | 0.261 | benign | 0.121 | Stabilizing | 0.999 | D | 0.603 | neutral | N | 0.416242724 | None | None | N |
E/L | 0.5339 | ambiguous | 0.5146 | ambiguous | 0.12 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/M | 0.5174 | ambiguous | 0.5027 | ambiguous | 0.322 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
E/N | 0.3421 | ambiguous | 0.321 | benign | -0.333 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/P | 0.9649 | likely_pathogenic | 0.9465 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Q | 0.2029 | likely_benign | 0.1863 | benign | -0.255 | Destabilizing | 1.0 | D | 0.668 | neutral | N | 0.448581409 | None | None | N |
E/R | 0.5029 | ambiguous | 0.4566 | ambiguous | 0.34 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.296 | likely_benign | 0.278 | benign | -0.505 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
E/T | 0.2636 | likely_benign | 0.2548 | benign | -0.285 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/V | 0.2249 | likely_benign | 0.2169 | benign | -0.084 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.381677999 | None | None | N |
E/W | 0.9632 | likely_pathogenic | 0.9567 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/Y | 0.7762 | likely_pathogenic | 0.7507 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.