Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22850 | 68773;68774;68775 | chr2:178577878;178577877;178577876 | chr2:179442605;179442604;179442603 |
N2AB | 21209 | 63850;63851;63852 | chr2:178577878;178577877;178577876 | chr2:179442605;179442604;179442603 |
N2A | 20282 | 61069;61070;61071 | chr2:178577878;178577877;178577876 | chr2:179442605;179442604;179442603 |
N2B | 13785 | 41578;41579;41580 | chr2:178577878;178577877;178577876 | chr2:179442605;179442604;179442603 |
Novex-1 | 13910 | 41953;41954;41955 | chr2:178577878;178577877;178577876 | chr2:179442605;179442604;179442603 |
Novex-2 | 13977 | 42154;42155;42156 | chr2:178577878;178577877;178577876 | chr2:179442605;179442604;179442603 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs934106303 | None | 0.994 | N | 0.741 | 0.4 | 0.733297738924 | gnomAD-4.0.0 | 1.6628E-06 | None | None | None | None | N | None | 6.06281E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2909 | likely_benign | 0.3337 | benign | -1.47 | Destabilizing | 0.892 | D | 0.517 | neutral | N | 0.472517226 | None | None | N |
V/C | 0.8438 | likely_pathogenic | 0.8557 | pathogenic | -1.087 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/D | 0.8444 | likely_pathogenic | 0.8493 | pathogenic | -1.382 | Destabilizing | 0.025 | N | 0.477 | neutral | N | 0.509675025 | None | None | N |
V/E | 0.7989 | likely_pathogenic | 0.8112 | pathogenic | -1.304 | Destabilizing | 0.845 | D | 0.654 | neutral | None | None | None | None | N |
V/F | 0.4262 | ambiguous | 0.4573 | ambiguous | -0.946 | Destabilizing | 0.994 | D | 0.741 | deleterious | N | 0.510619169 | None | None | N |
V/G | 0.5003 | ambiguous | 0.5223 | ambiguous | -1.857 | Destabilizing | 0.967 | D | 0.724 | prob.delet. | N | 0.520017372 | None | None | N |
V/H | 0.9259 | likely_pathogenic | 0.9333 | pathogenic | -1.307 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
V/I | 0.0881 | likely_benign | 0.0884 | benign | -0.481 | Destabilizing | 0.873 | D | 0.561 | neutral | N | 0.492297852 | None | None | N |
V/K | 0.8373 | likely_pathogenic | 0.8552 | pathogenic | -1.315 | Destabilizing | 0.975 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/L | 0.4159 | ambiguous | 0.443 | ambiguous | -0.481 | Destabilizing | 0.873 | D | 0.524 | neutral | N | 0.517521583 | None | None | N |
V/M | 0.3133 | likely_benign | 0.3203 | benign | -0.484 | Destabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | N |
V/N | 0.7004 | likely_pathogenic | 0.7151 | pathogenic | -1.314 | Destabilizing | 0.95 | D | 0.775 | deleterious | None | None | None | None | N |
V/P | 0.4334 | ambiguous | 0.4753 | ambiguous | -0.777 | Destabilizing | 0.987 | D | 0.759 | deleterious | None | None | None | None | N |
V/Q | 0.8406 | likely_pathogenic | 0.8516 | pathogenic | -1.351 | Destabilizing | 0.987 | D | 0.765 | deleterious | None | None | None | None | N |
V/R | 0.8098 | likely_pathogenic | 0.8366 | pathogenic | -0.9 | Destabilizing | 0.987 | D | 0.79 | deleterious | None | None | None | None | N |
V/S | 0.5977 | likely_pathogenic | 0.6291 | pathogenic | -1.872 | Destabilizing | 0.975 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/T | 0.4866 | ambiguous | 0.5218 | ambiguous | -1.662 | Destabilizing | 0.916 | D | 0.589 | neutral | None | None | None | None | N |
V/W | 0.9538 | likely_pathogenic | 0.9569 | pathogenic | -1.217 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/Y | 0.7972 | likely_pathogenic | 0.8183 | pathogenic | -0.875 | Destabilizing | 0.996 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.