Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22853 | 68782;68783;68784 | chr2:178577869;178577868;178577867 | chr2:179442596;179442595;179442594 |
N2AB | 21212 | 63859;63860;63861 | chr2:178577869;178577868;178577867 | chr2:179442596;179442595;179442594 |
N2A | 20285 | 61078;61079;61080 | chr2:178577869;178577868;178577867 | chr2:179442596;179442595;179442594 |
N2B | 13788 | 41587;41588;41589 | chr2:178577869;178577868;178577867 | chr2:179442596;179442595;179442594 |
Novex-1 | 13913 | 41962;41963;41964 | chr2:178577869;178577868;178577867 | chr2:179442596;179442595;179442594 |
Novex-2 | 13980 | 42163;42164;42165 | chr2:178577869;178577868;178577867 | chr2:179442596;179442595;179442594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | None | N | 0.051 | 0.147 | 0.435152311215 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4637 | ambiguous | 0.4327 | ambiguous | -1.765 | Destabilizing | 0.007 | N | 0.229 | neutral | None | None | None | None | N |
I/C | 0.6734 | likely_pathogenic | 0.6488 | pathogenic | -1.808 | Destabilizing | 0.356 | N | 0.363 | neutral | None | None | None | None | N |
I/D | 0.8899 | likely_pathogenic | 0.8795 | pathogenic | -2.285 | Highly Destabilizing | 0.356 | N | 0.517 | neutral | None | None | None | None | N |
I/E | 0.7527 | likely_pathogenic | 0.7613 | pathogenic | -2.271 | Highly Destabilizing | 0.136 | N | 0.458 | neutral | None | None | None | None | N |
I/F | 0.3845 | ambiguous | 0.3513 | ambiguous | -1.535 | Destabilizing | 0.072 | N | 0.276 | neutral | None | None | None | None | N |
I/G | 0.7912 | likely_pathogenic | 0.7421 | pathogenic | -2.07 | Highly Destabilizing | 0.136 | N | 0.436 | neutral | None | None | None | None | N |
I/H | 0.73 | likely_pathogenic | 0.7173 | pathogenic | -1.379 | Destabilizing | 0.864 | D | 0.409 | neutral | None | None | None | None | N |
I/K | 0.4787 | ambiguous | 0.5225 | ambiguous | -1.307 | Destabilizing | 0.106 | N | 0.444 | neutral | N | 0.509998178 | None | None | N |
I/L | 0.2376 | likely_benign | 0.2155 | benign | -0.983 | Destabilizing | None | N | 0.051 | neutral | N | 0.519367023 | None | None | N |
I/M | 0.1621 | likely_benign | 0.1562 | benign | -1.021 | Destabilizing | 0.171 | N | 0.377 | neutral | N | 0.493439967 | None | None | N |
I/N | 0.4728 | ambiguous | 0.4745 | ambiguous | -1.359 | Destabilizing | 0.628 | D | 0.491 | neutral | None | None | None | None | N |
I/P | 0.9355 | likely_pathogenic | 0.9206 | pathogenic | -1.216 | Destabilizing | 0.356 | N | 0.516 | neutral | None | None | None | None | N |
I/Q | 0.6076 | likely_pathogenic | 0.615 | pathogenic | -1.61 | Destabilizing | 0.628 | D | 0.487 | neutral | None | None | None | None | N |
I/R | 0.4179 | ambiguous | 0.4379 | ambiguous | -0.745 | Destabilizing | 0.295 | N | 0.497 | neutral | N | 0.476625931 | None | None | N |
I/S | 0.4102 | ambiguous | 0.3955 | ambiguous | -1.886 | Destabilizing | 0.072 | N | 0.397 | neutral | None | None | None | None | N |
I/T | 0.2282 | likely_benign | 0.2405 | benign | -1.756 | Destabilizing | 0.012 | N | 0.363 | neutral | N | 0.469206419 | None | None | N |
I/V | 0.0589 | likely_benign | 0.0568 | benign | -1.216 | Destabilizing | None | N | 0.065 | neutral | N | 0.399595548 | None | None | N |
I/W | 0.933 | likely_pathogenic | 0.9157 | pathogenic | -1.638 | Destabilizing | 0.864 | D | 0.417 | neutral | None | None | None | None | N |
I/Y | 0.7085 | likely_pathogenic | 0.6788 | pathogenic | -1.331 | Destabilizing | 0.136 | N | 0.462 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.