Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22854 | 68785;68786;68787 | chr2:178577866;178577865;178577864 | chr2:179442593;179442592;179442591 |
N2AB | 21213 | 63862;63863;63864 | chr2:178577866;178577865;178577864 | chr2:179442593;179442592;179442591 |
N2A | 20286 | 61081;61082;61083 | chr2:178577866;178577865;178577864 | chr2:179442593;179442592;179442591 |
N2B | 13789 | 41590;41591;41592 | chr2:178577866;178577865;178577864 | chr2:179442593;179442592;179442591 |
Novex-1 | 13914 | 41965;41966;41967 | chr2:178577866;178577865;178577864 | chr2:179442593;179442592;179442591 |
Novex-2 | 13981 | 42166;42167;42168 | chr2:178577866;178577865;178577864 | chr2:179442593;179442592;179442591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs2046780936 | None | 0.994 | N | 0.683 | 0.471 | 0.529510553188 | gnomAD-4.0.0 | 1.64253E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93962E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3492 | ambiguous | 0.3083 | benign | -0.572 | Destabilizing | 0.958 | D | 0.412 | neutral | N | 0.494378246 | None | None | N |
T/C | 0.7533 | likely_pathogenic | 0.7345 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/D | 0.7437 | likely_pathogenic | 0.7137 | pathogenic | -1.498 | Destabilizing | 0.086 | N | 0.331 | neutral | None | None | None | None | N |
T/E | 0.8089 | likely_pathogenic | 0.7945 | pathogenic | -1.48 | Destabilizing | 0.938 | D | 0.536 | neutral | None | None | None | None | N |
T/F | 0.782 | likely_pathogenic | 0.7527 | pathogenic | -0.771 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
T/G | 0.4073 | ambiguous | 0.3794 | ambiguous | -0.828 | Destabilizing | 0.968 | D | 0.593 | neutral | None | None | None | None | N |
T/H | 0.5891 | likely_pathogenic | 0.5646 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/I | 0.8739 | likely_pathogenic | 0.8438 | pathogenic | 0.021 | Stabilizing | 0.994 | D | 0.699 | prob.neutral | D | 0.537120896 | None | None | N |
T/K | 0.6201 | likely_pathogenic | 0.5998 | pathogenic | -0.838 | Destabilizing | 0.988 | D | 0.638 | neutral | N | 0.470589225 | None | None | N |
T/L | 0.4358 | ambiguous | 0.393 | ambiguous | 0.021 | Stabilizing | 0.984 | D | 0.569 | neutral | None | None | None | None | N |
T/M | 0.3152 | likely_benign | 0.2774 | benign | 0.399 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/N | 0.2829 | likely_benign | 0.2458 | benign | -1.095 | Destabilizing | 0.982 | D | 0.605 | neutral | None | None | None | None | N |
T/P | 0.8696 | likely_pathogenic | 0.8311 | pathogenic | -0.145 | Destabilizing | 0.994 | D | 0.698 | prob.neutral | D | 0.53053753 | None | None | N |
T/Q | 0.5411 | ambiguous | 0.5229 | ambiguous | -1.324 | Destabilizing | 0.995 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/R | 0.5727 | likely_pathogenic | 0.5585 | ambiguous | -0.549 | Destabilizing | 0.994 | D | 0.683 | prob.neutral | N | 0.494276114 | None | None | N |
T/S | 0.1523 | likely_benign | 0.1335 | benign | -1.128 | Destabilizing | 0.958 | D | 0.423 | neutral | N | 0.50178134 | None | None | N |
T/V | 0.7419 | likely_pathogenic | 0.7021 | pathogenic | -0.145 | Destabilizing | 0.984 | D | 0.507 | neutral | None | None | None | None | N |
T/W | 0.9407 | likely_pathogenic | 0.9356 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/Y | 0.7823 | likely_pathogenic | 0.7687 | pathogenic | -0.502 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.