Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22855 | 68788;68789;68790 | chr2:178577863;178577862;178577861 | chr2:179442590;179442589;179442588 |
N2AB | 21214 | 63865;63866;63867 | chr2:178577863;178577862;178577861 | chr2:179442590;179442589;179442588 |
N2A | 20287 | 61084;61085;61086 | chr2:178577863;178577862;178577861 | chr2:179442590;179442589;179442588 |
N2B | 13790 | 41593;41594;41595 | chr2:178577863;178577862;178577861 | chr2:179442590;179442589;179442588 |
Novex-1 | 13915 | 41968;41969;41970 | chr2:178577863;178577862;178577861 | chr2:179442590;179442589;179442588 |
Novex-2 | 13982 | 42169;42170;42171 | chr2:178577863;178577862;178577861 | chr2:179442590;179442589;179442588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.025 | N | 0.233 | 0.124 | 0.226586394389 | gnomAD-4.0.0 | 1.64144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93846E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7489 | likely_pathogenic | 0.7817 | pathogenic | -0.694 | Destabilizing | 0.845 | D | 0.641 | neutral | None | None | None | None | N |
R/C | 0.3638 | ambiguous | 0.3822 | ambiguous | -0.608 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
R/D | 0.9426 | likely_pathogenic | 0.9548 | pathogenic | -0.416 | Destabilizing | 0.975 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/E | 0.7648 | likely_pathogenic | 0.7877 | pathogenic | -0.357 | Destabilizing | 0.845 | D | 0.565 | neutral | None | None | None | None | N |
R/F | 0.9574 | likely_pathogenic | 0.9601 | pathogenic | -0.952 | Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
R/G | 0.5893 | likely_pathogenic | 0.5969 | pathogenic | -0.919 | Destabilizing | 0.892 | D | 0.615 | neutral | N | 0.482923433 | None | None | N |
R/H | 0.2569 | likely_benign | 0.2766 | benign | -1.268 | Destabilizing | 0.987 | D | 0.589 | neutral | None | None | None | None | N |
R/I | 0.853 | likely_pathogenic | 0.8734 | pathogenic | -0.115 | Destabilizing | 0.987 | D | 0.757 | deleterious | None | None | None | None | N |
R/K | 0.1666 | likely_benign | 0.185 | benign | -0.805 | Destabilizing | 0.025 | N | 0.233 | neutral | N | 0.424011203 | None | None | N |
R/L | 0.7491 | likely_pathogenic | 0.7659 | pathogenic | -0.115 | Destabilizing | 0.916 | D | 0.615 | neutral | None | None | None | None | N |
R/M | 0.7806 | likely_pathogenic | 0.8126 | pathogenic | -0.149 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.501323097 | None | None | N |
R/N | 0.8685 | likely_pathogenic | 0.9041 | pathogenic | -0.226 | Destabilizing | 0.975 | D | 0.598 | neutral | None | None | None | None | N |
R/P | 0.8821 | likely_pathogenic | 0.8857 | pathogenic | -0.289 | Destabilizing | 0.987 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/Q | 0.2112 | likely_benign | 0.2235 | benign | -0.546 | Destabilizing | 0.975 | D | 0.616 | neutral | None | None | None | None | N |
R/S | 0.8269 | likely_pathogenic | 0.8509 | pathogenic | -0.859 | Destabilizing | 0.892 | D | 0.649 | neutral | N | 0.483478007 | None | None | N |
R/T | 0.776 | likely_pathogenic | 0.8154 | pathogenic | -0.66 | Destabilizing | 0.967 | D | 0.628 | neutral | N | 0.464047723 | None | None | N |
R/V | 0.868 | likely_pathogenic | 0.8863 | pathogenic | -0.289 | Destabilizing | 0.975 | D | 0.729 | prob.delet. | None | None | None | None | N |
R/W | 0.6345 | likely_pathogenic | 0.637 | pathogenic | -0.746 | Destabilizing | 0.999 | D | 0.793 | deleterious | N | 0.507906463 | None | None | N |
R/Y | 0.8427 | likely_pathogenic | 0.8606 | pathogenic | -0.382 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.