Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22868 | 68827;68828;68829 | chr2:178577824;178577823;178577822 | chr2:179442551;179442550;179442549 |
N2AB | 21227 | 63904;63905;63906 | chr2:178577824;178577823;178577822 | chr2:179442551;179442550;179442549 |
N2A | 20300 | 61123;61124;61125 | chr2:178577824;178577823;178577822 | chr2:179442551;179442550;179442549 |
N2B | 13803 | 41632;41633;41634 | chr2:178577824;178577823;178577822 | chr2:179442551;179442550;179442549 |
Novex-1 | 13928 | 42007;42008;42009 | chr2:178577824;178577823;178577822 | chr2:179442551;179442550;179442549 |
Novex-2 | 13995 | 42208;42209;42210 | chr2:178577824;178577823;178577822 | chr2:179442551;179442550;179442549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs750368181 | -0.268 | 1.0 | N | 0.44 | 0.438 | 0.410868550352 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
D/E | rs750368181 | -0.268 | 1.0 | N | 0.44 | 0.438 | 0.410868550352 | gnomAD-4.0.0 | 6.85305E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16499E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6064 | likely_pathogenic | 0.6823 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.494045397 | None | None | I |
D/C | 0.909 | likely_pathogenic | 0.9311 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
D/E | 0.7309 | likely_pathogenic | 0.8057 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.44 | neutral | N | 0.50224815 | None | None | I |
D/F | 0.9336 | likely_pathogenic | 0.9517 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/G | 0.6016 | likely_pathogenic | 0.6719 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.533420685 | None | None | I |
D/H | 0.7162 | likely_pathogenic | 0.7808 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.51768306 | None | None | I |
D/I | 0.8662 | likely_pathogenic | 0.9029 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/K | 0.8743 | likely_pathogenic | 0.9194 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
D/L | 0.8324 | likely_pathogenic | 0.8787 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
D/M | 0.9332 | likely_pathogenic | 0.9522 | pathogenic | 0.926 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
D/N | 0.1354 | likely_benign | 0.1826 | benign | -1.117 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.483271749 | None | None | I |
D/P | 0.9308 | likely_pathogenic | 0.953 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
D/Q | 0.8325 | likely_pathogenic | 0.8757 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
D/R | 0.8603 | likely_pathogenic | 0.902 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
D/S | 0.2568 | likely_benign | 0.3193 | benign | -1.484 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
D/T | 0.3743 | ambiguous | 0.4591 | ambiguous | -1.148 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
D/V | 0.7125 | likely_pathogenic | 0.7818 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.759 | deleterious | N | 0.51553024 | None | None | I |
D/W | 0.9868 | likely_pathogenic | 0.9895 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
D/Y | 0.6925 | likely_pathogenic | 0.7531 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | D | 0.55629788 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.