Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22871 | 68836;68837;68838 | chr2:178577815;178577814;178577813 | chr2:179442542;179442541;179442540 |
N2AB | 21230 | 63913;63914;63915 | chr2:178577815;178577814;178577813 | chr2:179442542;179442541;179442540 |
N2A | 20303 | 61132;61133;61134 | chr2:178577815;178577814;178577813 | chr2:179442542;179442541;179442540 |
N2B | 13806 | 41641;41642;41643 | chr2:178577815;178577814;178577813 | chr2:179442542;179442541;179442540 |
Novex-1 | 13931 | 42016;42017;42018 | chr2:178577815;178577814;178577813 | chr2:179442542;179442541;179442540 |
Novex-2 | 13998 | 42217;42218;42219 | chr2:178577815;178577814;178577813 | chr2:179442542;179442541;179442540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs761622490 | 0.42 | 0.684 | N | 0.711 | 0.347 | 0.444505407614 | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.24568E-04 | None | 0 | None | 0 | 0 | 0 |
H/L | rs761622490 | 0.42 | 0.684 | N | 0.711 | 0.347 | 0.444505407614 | gnomAD-4.0.0 | 4.7847E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 8.34678E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs761622490 | -0.258 | 0.884 | N | 0.635 | 0.336 | 0.242825505644 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs761622490 | -0.258 | 0.884 | N | 0.635 | 0.336 | 0.242825505644 | gnomAD-4.0.0 | 3.1898E-06 | None | None | None | None | I | None | 5.67151E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02847E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7203 | likely_pathogenic | 0.7588 | pathogenic | 0.057 | Stabilizing | 0.59 | D | 0.612 | neutral | None | None | None | None | I |
H/C | 0.2978 | likely_benign | 0.3267 | benign | 0.508 | Stabilizing | 0.996 | D | 0.722 | prob.delet. | None | None | None | None | I |
H/D | 0.7795 | likely_pathogenic | 0.8161 | pathogenic | 0.128 | Stabilizing | 0.684 | D | 0.635 | neutral | N | 0.453216602 | None | None | I |
H/E | 0.8058 | likely_pathogenic | 0.8444 | pathogenic | 0.127 | Stabilizing | 0.742 | D | 0.606 | neutral | None | None | None | None | I |
H/F | 0.4092 | ambiguous | 0.4519 | ambiguous | 0.341 | Stabilizing | 0.835 | D | 0.621 | neutral | None | None | None | None | I |
H/G | 0.749 | likely_pathogenic | 0.7877 | pathogenic | -0.183 | Destabilizing | 0.59 | D | 0.67 | neutral | None | None | None | None | I |
H/I | 0.7693 | likely_pathogenic | 0.7899 | pathogenic | 0.649 | Stabilizing | 0.953 | D | 0.712 | prob.delet. | None | None | None | None | I |
H/K | 0.6946 | likely_pathogenic | 0.7466 | pathogenic | 0.091 | Stabilizing | 0.742 | D | 0.648 | neutral | None | None | None | None | I |
H/L | 0.3802 | ambiguous | 0.4109 | ambiguous | 0.649 | Stabilizing | 0.684 | D | 0.711 | prob.delet. | N | 0.444925193 | None | None | I |
H/M | 0.7646 | likely_pathogenic | 0.789 | pathogenic | 0.618 | Stabilizing | 0.996 | D | 0.696 | prob.neutral | None | None | None | None | I |
H/N | 0.3538 | ambiguous | 0.3748 | ambiguous | 0.251 | Stabilizing | 0.684 | D | 0.651 | neutral | N | 0.430033098 | None | None | I |
H/P | 0.8859 | likely_pathogenic | 0.8956 | pathogenic | 0.477 | Stabilizing | 0.939 | D | 0.69 | prob.neutral | N | 0.489985479 | None | None | I |
H/Q | 0.5391 | ambiguous | 0.5757 | pathogenic | 0.257 | Stabilizing | 0.884 | D | 0.637 | neutral | N | 0.450331012 | None | None | I |
H/R | 0.414 | ambiguous | 0.4841 | ambiguous | -0.193 | Destabilizing | 0.884 | D | 0.635 | neutral | N | 0.449117504 | None | None | I |
H/S | 0.5435 | ambiguous | 0.5702 | pathogenic | 0.188 | Stabilizing | 0.037 | N | 0.439 | neutral | None | None | None | None | I |
H/T | 0.788 | likely_pathogenic | 0.8131 | pathogenic | 0.277 | Stabilizing | 0.59 | D | 0.694 | prob.neutral | None | None | None | None | I |
H/V | 0.7075 | likely_pathogenic | 0.7404 | pathogenic | 0.477 | Stabilizing | 0.91 | D | 0.713 | prob.delet. | None | None | None | None | I |
H/W | 0.575 | likely_pathogenic | 0.6202 | pathogenic | 0.309 | Stabilizing | 0.996 | D | 0.697 | prob.neutral | None | None | None | None | I |
H/Y | 0.1441 | likely_benign | 0.1655 | benign | 0.703 | Stabilizing | 0.028 | N | 0.382 | neutral | N | 0.497796885 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.