Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22882 | 68869;68870;68871 | chr2:178577782;178577781;178577780 | chr2:179442509;179442508;179442507 |
N2AB | 21241 | 63946;63947;63948 | chr2:178577782;178577781;178577780 | chr2:179442509;179442508;179442507 |
N2A | 20314 | 61165;61166;61167 | chr2:178577782;178577781;178577780 | chr2:179442509;179442508;179442507 |
N2B | 13817 | 41674;41675;41676 | chr2:178577782;178577781;178577780 | chr2:179442509;179442508;179442507 |
Novex-1 | 13942 | 42049;42050;42051 | chr2:178577782;178577781;178577780 | chr2:179442509;179442508;179442507 |
Novex-2 | 14009 | 42250;42251;42252 | chr2:178577782;178577781;178577780 | chr2:179442509;179442508;179442507 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.001 | N | 0.195 | 0.039 | 0.168933306366 | gnomAD-4.0.0 | 1.59244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02535E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1791 | likely_benign | 0.1865 | benign | -0.48 | Destabilizing | 0.201 | N | 0.53 | neutral | N | 0.465341624 | None | None | N |
D/C | 0.573 | likely_pathogenic | 0.5891 | pathogenic | -0.219 | Destabilizing | 0.982 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/E | 0.1234 | likely_benign | 0.1251 | benign | -0.793 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.392186786 | None | None | N |
D/F | 0.5499 | ambiguous | 0.5632 | ambiguous | -0.034 | Destabilizing | 0.935 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/G | 0.2647 | likely_benign | 0.2662 | benign | -0.867 | Destabilizing | 0.334 | N | 0.51 | neutral | N | 0.521828538 | None | None | N |
D/H | 0.3325 | likely_benign | 0.3411 | ambiguous | -0.432 | Destabilizing | 0.931 | D | 0.608 | neutral | N | 0.49054945 | None | None | N |
D/I | 0.2758 | likely_benign | 0.2862 | benign | 0.553 | Stabilizing | 0.826 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/K | 0.4281 | ambiguous | 0.4555 | ambiguous | -0.432 | Destabilizing | 0.25 | N | 0.475 | neutral | None | None | None | None | N |
D/L | 0.2938 | likely_benign | 0.3085 | benign | 0.553 | Stabilizing | 0.7 | D | 0.696 | prob.neutral | None | None | None | None | N |
D/M | 0.4966 | ambiguous | 0.5148 | ambiguous | 1.02 | Stabilizing | 0.982 | D | 0.671 | neutral | None | None | None | None | N |
D/N | 0.1264 | likely_benign | 0.1279 | benign | -0.917 | Destabilizing | 0.334 | N | 0.509 | neutral | N | 0.490966913 | None | None | N |
D/P | 0.5567 | ambiguous | 0.5623 | ambiguous | 0.235 | Stabilizing | 0.826 | D | 0.601 | neutral | None | None | None | None | N |
D/Q | 0.3231 | likely_benign | 0.3322 | benign | -0.743 | Destabilizing | 0.539 | D | 0.521 | neutral | None | None | None | None | N |
D/R | 0.4988 | ambiguous | 0.5195 | ambiguous | -0.298 | Destabilizing | 0.539 | D | 0.636 | neutral | None | None | None | None | N |
D/S | 0.1517 | likely_benign | 0.1544 | benign | -1.209 | Destabilizing | 0.25 | N | 0.457 | neutral | None | None | None | None | N |
D/T | 0.2682 | likely_benign | 0.2782 | benign | -0.884 | Destabilizing | 0.7 | D | 0.525 | neutral | None | None | None | None | N |
D/V | 0.1769 | likely_benign | 0.1842 | benign | 0.235 | Stabilizing | 0.638 | D | 0.689 | prob.neutral | N | 0.518596232 | None | None | N |
D/W | 0.8685 | likely_pathogenic | 0.8786 | pathogenic | 0.118 | Stabilizing | 0.982 | D | 0.665 | neutral | None | None | None | None | N |
D/Y | 0.2337 | likely_benign | 0.2442 | benign | 0.21 | Stabilizing | 0.916 | D | 0.703 | prob.neutral | N | 0.509667663 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.