Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22884 | 68875;68876;68877 | chr2:178577776;178577775;178577774 | chr2:179442503;179442502;179442501 |
N2AB | 21243 | 63952;63953;63954 | chr2:178577776;178577775;178577774 | chr2:179442503;179442502;179442501 |
N2A | 20316 | 61171;61172;61173 | chr2:178577776;178577775;178577774 | chr2:179442503;179442502;179442501 |
N2B | 13819 | 41680;41681;41682 | chr2:178577776;178577775;178577774 | chr2:179442503;179442502;179442501 |
Novex-1 | 13944 | 42055;42056;42057 | chr2:178577776;178577775;178577774 | chr2:179442503;179442502;179442501 |
Novex-2 | 14011 | 42256;42257;42258 | chr2:178577776;178577775;178577774 | chr2:179442503;179442502;179442501 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2046764979 | None | 0.942 | N | 0.439 | 0.298 | 0.521917627825 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs2046764979 | None | 0.942 | N | 0.439 | 0.298 | 0.521917627825 | gnomAD-4.0.0 | 6.57774E-06 | None | None | None | None | N | None | 0 | 6.55308E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1866 | likely_benign | 0.1673 | benign | -0.402 | Destabilizing | 0.058 | N | 0.306 | neutral | N | 0.492158992 | None | None | N |
P/C | 0.6956 | likely_pathogenic | 0.6749 | pathogenic | -0.858 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
P/D | 0.4988 | ambiguous | 0.4557 | ambiguous | -0.368 | Destabilizing | 0.019 | N | 0.314 | neutral | None | None | None | None | N |
P/E | 0.4261 | ambiguous | 0.3831 | ambiguous | -0.477 | Destabilizing | 0.754 | D | 0.378 | neutral | None | None | None | None | N |
P/F | 0.7312 | likely_pathogenic | 0.685 | pathogenic | -0.734 | Destabilizing | 0.993 | D | 0.516 | neutral | None | None | None | None | N |
P/G | 0.3121 | likely_benign | 0.2973 | benign | -0.464 | Destabilizing | 0.008 | N | 0.263 | neutral | None | None | None | None | N |
P/H | 0.3572 | ambiguous | 0.318 | benign | -0.004 | Destabilizing | 0.997 | D | 0.499 | neutral | N | 0.484255573 | None | None | N |
P/I | 0.5631 | ambiguous | 0.5139 | ambiguous | -0.375 | Destabilizing | 0.978 | D | 0.507 | neutral | None | None | None | None | N |
P/K | 0.4871 | ambiguous | 0.4359 | ambiguous | -0.457 | Destabilizing | 0.956 | D | 0.358 | neutral | None | None | None | None | N |
P/L | 0.2778 | likely_benign | 0.2448 | benign | -0.375 | Destabilizing | 0.942 | D | 0.439 | neutral | N | 0.473708961 | None | None | N |
P/M | 0.5404 | ambiguous | 0.5019 | ambiguous | -0.649 | Destabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
P/N | 0.4336 | ambiguous | 0.3976 | ambiguous | -0.286 | Destabilizing | 0.956 | D | 0.415 | neutral | None | None | None | None | N |
P/Q | 0.3046 | likely_benign | 0.28 | benign | -0.483 | Destabilizing | 0.978 | D | 0.403 | neutral | None | None | None | None | N |
P/R | 0.3783 | ambiguous | 0.3302 | benign | -0.004 | Destabilizing | 0.97 | D | 0.469 | neutral | N | 0.520113598 | None | None | N |
P/S | 0.2459 | likely_benign | 0.2171 | benign | -0.602 | Destabilizing | 0.698 | D | 0.343 | neutral | N | 0.49660202 | None | None | N |
P/T | 0.2114 | likely_benign | 0.1859 | benign | -0.62 | Destabilizing | 0.822 | D | 0.363 | neutral | N | 0.514726421 | None | None | N |
P/V | 0.4134 | ambiguous | 0.3718 | ambiguous | -0.357 | Destabilizing | 0.956 | D | 0.391 | neutral | None | None | None | None | N |
P/W | 0.8502 | likely_pathogenic | 0.8084 | pathogenic | -0.784 | Destabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
P/Y | 0.6138 | likely_pathogenic | 0.5758 | pathogenic | -0.526 | Destabilizing | 0.993 | D | 0.515 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.