Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22895 | 68908;68909;68910 | chr2:178577743;178577742;178577741 | chr2:179442470;179442469;179442468 |
N2AB | 21254 | 63985;63986;63987 | chr2:178577743;178577742;178577741 | chr2:179442470;179442469;179442468 |
N2A | 20327 | 61204;61205;61206 | chr2:178577743;178577742;178577741 | chr2:179442470;179442469;179442468 |
N2B | 13830 | 41713;41714;41715 | chr2:178577743;178577742;178577741 | chr2:179442470;179442469;179442468 |
Novex-1 | 13955 | 42088;42089;42090 | chr2:178577743;178577742;178577741 | chr2:179442470;179442469;179442468 |
Novex-2 | 14022 | 42289;42290;42291 | chr2:178577743;178577742;178577741 | chr2:179442470;179442469;179442468 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs2046758201 | None | 0.958 | N | 0.399 | 0.397 | 0.315609569513 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3078 | likely_benign | 0.3449 | ambiguous | -0.394 | Destabilizing | 0.938 | D | 0.539 | neutral | None | None | None | None | N |
N/C | 0.4082 | ambiguous | 0.4535 | ambiguous | 0.291 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
N/D | 0.3439 | ambiguous | 0.3989 | ambiguous | 0.061 | Stabilizing | 0.958 | D | 0.399 | neutral | N | 0.489564191 | None | None | N |
N/E | 0.7343 | likely_pathogenic | 0.7969 | pathogenic | 0.023 | Stabilizing | 0.938 | D | 0.431 | neutral | None | None | None | None | N |
N/F | 0.6249 | likely_pathogenic | 0.6801 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/G | 0.494 | ambiguous | 0.5225 | ambiguous | -0.561 | Destabilizing | 0.968 | D | 0.41 | neutral | None | None | None | None | N |
N/H | 0.2037 | likely_benign | 0.2432 | benign | -0.621 | Destabilizing | 0.994 | D | 0.637 | neutral | N | 0.476296763 | None | None | N |
N/I | 0.2149 | likely_benign | 0.2438 | benign | -0.042 | Destabilizing | 0.994 | D | 0.759 | deleterious | N | 0.469357776 | None | None | N |
N/K | 0.7401 | likely_pathogenic | 0.8033 | pathogenic | 0.107 | Stabilizing | 0.067 | N | 0.304 | neutral | D | 0.523868766 | None | None | N |
N/L | 0.2305 | likely_benign | 0.2588 | benign | -0.042 | Destabilizing | 0.991 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/M | 0.327 | likely_benign | 0.3596 | ambiguous | 0.348 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
N/P | 0.4586 | ambiguous | 0.539 | ambiguous | -0.133 | Destabilizing | 0.995 | D | 0.71 | prob.delet. | None | None | None | None | N |
N/Q | 0.6061 | likely_pathogenic | 0.6708 | pathogenic | -0.427 | Destabilizing | 0.991 | D | 0.65 | neutral | None | None | None | None | N |
N/R | 0.7331 | likely_pathogenic | 0.8026 | pathogenic | 0.155 | Stabilizing | 0.982 | D | 0.549 | neutral | None | None | None | None | N |
N/S | 0.1101 | likely_benign | 0.1127 | benign | -0.171 | Destabilizing | 0.958 | D | 0.375 | neutral | N | 0.46492355 | None | None | N |
N/T | 0.1658 | likely_benign | 0.1755 | benign | -0.064 | Destabilizing | 0.958 | D | 0.466 | neutral | N | 0.506165652 | None | None | N |
N/V | 0.2363 | likely_benign | 0.2666 | benign | -0.133 | Destabilizing | 0.991 | D | 0.745 | deleterious | None | None | None | None | N |
N/W | 0.8615 | likely_pathogenic | 0.897 | pathogenic | -0.753 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
N/Y | 0.251 | likely_benign | 0.3052 | benign | -0.487 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | N | 0.497630249 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.