Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22898 | 68917;68918;68919 | chr2:178577734;178577733;178577732 | chr2:179442461;179442460;179442459 |
N2AB | 21257 | 63994;63995;63996 | chr2:178577734;178577733;178577732 | chr2:179442461;179442460;179442459 |
N2A | 20330 | 61213;61214;61215 | chr2:178577734;178577733;178577732 | chr2:179442461;179442460;179442459 |
N2B | 13833 | 41722;41723;41724 | chr2:178577734;178577733;178577732 | chr2:179442461;179442460;179442459 |
Novex-1 | 13958 | 42097;42098;42099 | chr2:178577734;178577733;178577732 | chr2:179442461;179442460;179442459 |
Novex-2 | 14025 | 42298;42299;42300 | chr2:178577734;178577733;178577732 | chr2:179442461;179442460;179442459 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1416793414 | None | 0.024 | N | 0.315 | 0.133 | 0.181679512989 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
E/K | rs1416793414 | None | 0.024 | N | 0.315 | 0.133 | 0.181679512989 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
E/Q | rs1416793414 | -0.103 | 0.055 | N | 0.327 | 0.112 | 0.170165803431 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 1.18203E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1416793414 | -0.103 | 0.055 | N | 0.327 | 0.112 | 0.170165803431 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1416793414 | -0.103 | 0.055 | N | 0.327 | 0.112 | 0.170165803431 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | I | None | 0 | 6.54793E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1202 | likely_benign | 0.1253 | benign | -0.249 | Destabilizing | 0.005 | N | 0.267 | neutral | N | 0.477517614 | None | None | I |
E/C | 0.6983 | likely_pathogenic | 0.7167 | pathogenic | -0.376 | Destabilizing | 0.864 | D | 0.336 | neutral | None | None | None | None | I |
E/D | 0.0588 | likely_benign | 0.061 | benign | -0.466 | Destabilizing | None | N | 0.093 | neutral | N | 0.422339121 | None | None | I |
E/F | 0.5706 | likely_pathogenic | 0.6294 | pathogenic | 0.005 | Stabilizing | 0.628 | D | 0.36 | neutral | None | None | None | None | I |
E/G | 0.1251 | likely_benign | 0.1297 | benign | -0.453 | Destabilizing | None | N | 0.22 | neutral | N | 0.478901693 | None | None | I |
E/H | 0.3347 | likely_benign | 0.372 | ambiguous | 0.509 | Stabilizing | 0.356 | N | 0.39 | neutral | None | None | None | None | I |
E/I | 0.2826 | likely_benign | 0.3091 | benign | 0.257 | Stabilizing | 0.356 | N | 0.388 | neutral | None | None | None | None | I |
E/K | 0.1771 | likely_benign | 0.196 | benign | 0.164 | Stabilizing | 0.024 | N | 0.315 | neutral | N | 0.48074992 | None | None | I |
E/L | 0.3023 | likely_benign | 0.3265 | benign | 0.257 | Stabilizing | 0.072 | N | 0.43 | neutral | None | None | None | None | I |
E/M | 0.401 | ambiguous | 0.4202 | ambiguous | 0.043 | Stabilizing | 0.864 | D | 0.321 | neutral | None | None | None | None | I |
E/N | 0.1156 | likely_benign | 0.124 | benign | -0.26 | Destabilizing | 0.016 | N | 0.297 | neutral | None | None | None | None | I |
E/P | 0.6849 | likely_pathogenic | 0.6775 | pathogenic | 0.108 | Stabilizing | 0.136 | N | 0.42 | neutral | None | None | None | None | I |
E/Q | 0.1482 | likely_benign | 0.1524 | benign | -0.2 | Destabilizing | 0.055 | N | 0.327 | neutral | N | 0.463012308 | None | None | I |
E/R | 0.2727 | likely_benign | 0.3047 | benign | 0.566 | Stabilizing | 0.072 | N | 0.364 | neutral | None | None | None | None | I |
E/S | 0.1202 | likely_benign | 0.1247 | benign | -0.412 | Destabilizing | 0.001 | N | 0.109 | neutral | None | None | None | None | I |
E/T | 0.1587 | likely_benign | 0.1545 | benign | -0.239 | Destabilizing | 0.016 | N | 0.352 | neutral | None | None | None | None | I |
E/V | 0.1792 | likely_benign | 0.1978 | benign | 0.108 | Stabilizing | 0.106 | N | 0.395 | neutral | N | 0.505821723 | None | None | I |
E/W | 0.8494 | likely_pathogenic | 0.8724 | pathogenic | 0.157 | Stabilizing | 0.864 | D | 0.356 | neutral | None | None | None | None | I |
E/Y | 0.4087 | ambiguous | 0.4704 | ambiguous | 0.248 | Stabilizing | 0.628 | D | 0.342 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.