Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22899 | 68920;68921;68922 | chr2:178577731;178577730;178577729 | chr2:179442458;179442457;179442456 |
N2AB | 21258 | 63997;63998;63999 | chr2:178577731;178577730;178577729 | chr2:179442458;179442457;179442456 |
N2A | 20331 | 61216;61217;61218 | chr2:178577731;178577730;178577729 | chr2:179442458;179442457;179442456 |
N2B | 13834 | 41725;41726;41727 | chr2:178577731;178577730;178577729 | chr2:179442458;179442457;179442456 |
Novex-1 | 13959 | 42100;42101;42102 | chr2:178577731;178577730;178577729 | chr2:179442458;179442457;179442456 |
Novex-2 | 14026 | 42301;42302;42303 | chr2:178577731;178577730;178577729 | chr2:179442458;179442457;179442456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 1.0 | N | 0.783 | 0.367 | 0.739227818891 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3828 | ambiguous | 0.3967 | ambiguous | -1.7 | Destabilizing | 0.998 | D | 0.48 | neutral | None | None | None | None | N |
C/D | 0.7332 | likely_pathogenic | 0.721 | pathogenic | -0.781 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
C/E | 0.7021 | likely_pathogenic | 0.7372 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
C/F | 0.3698 | ambiguous | 0.3665 | ambiguous | -1.079 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.507224445 | None | None | N |
C/G | 0.1927 | likely_benign | 0.1842 | benign | -2.028 | Highly Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.495256257 | None | None | N |
C/H | 0.457 | ambiguous | 0.4542 | ambiguous | -1.869 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
C/I | 0.633 | likely_pathogenic | 0.6691 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
C/K | 0.4871 | ambiguous | 0.5204 | ambiguous | -0.933 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
C/L | 0.3745 | ambiguous | 0.4063 | ambiguous | -0.827 | Destabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | N |
C/M | 0.5239 | ambiguous | 0.5503 | ambiguous | 0.282 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
C/N | 0.3085 | likely_benign | 0.3006 | benign | -1.334 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
C/P | 0.5796 | likely_pathogenic | 0.6998 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
C/Q | 0.4434 | ambiguous | 0.4847 | ambiguous | -1.049 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
C/R | 0.2486 | likely_benign | 0.2734 | benign | -0.947 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.472957156 | None | None | N |
C/S | 0.3437 | ambiguous | 0.3305 | benign | -1.782 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.511280684 | None | None | N |
C/T | 0.2944 | likely_benign | 0.2928 | benign | -1.423 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
C/V | 0.4958 | ambiguous | 0.5251 | ambiguous | -1.095 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
C/W | 0.6685 | likely_pathogenic | 0.6732 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.496523704 | None | None | N |
C/Y | 0.3533 | ambiguous | 0.3432 | ambiguous | -1.124 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.516844006 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.