Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22901 | 68926;68927;68928 | chr2:178577725;178577724;178577723 | chr2:179442452;179442451;179442450 |
N2AB | 21260 | 64003;64004;64005 | chr2:178577725;178577724;178577723 | chr2:179442452;179442451;179442450 |
N2A | 20333 | 61222;61223;61224 | chr2:178577725;178577724;178577723 | chr2:179442452;179442451;179442450 |
N2B | 13836 | 41731;41732;41733 | chr2:178577725;178577724;178577723 | chr2:179442452;179442451;179442450 |
Novex-1 | 13961 | 42106;42107;42108 | chr2:178577725;178577724;178577723 | chr2:179442452;179442451;179442450 |
Novex-2 | 14028 | 42307;42308;42309 | chr2:178577725;178577724;178577723 | chr2:179442452;179442451;179442450 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/Y | None | None | None | N | 0.16 | 0.091 | None | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85958E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9557 | likely_pathogenic | 0.9569 | pathogenic | -2.305 | Highly Destabilizing | 0.241 | N | 0.513 | neutral | None | None | None | None | I |
F/C | 0.7437 | likely_pathogenic | 0.7359 | pathogenic | -1.495 | Destabilizing | 0.975 | D | 0.585 | neutral | N | 0.519020306 | None | None | I |
F/D | 0.9888 | likely_pathogenic | 0.99 | pathogenic | -1.674 | Destabilizing | 0.818 | D | 0.6 | neutral | None | None | None | None | I |
F/E | 0.9906 | likely_pathogenic | 0.9915 | pathogenic | -1.528 | Destabilizing | 0.818 | D | 0.595 | neutral | None | None | None | None | I |
F/G | 0.9773 | likely_pathogenic | 0.9776 | pathogenic | -2.695 | Highly Destabilizing | 0.563 | D | 0.552 | neutral | None | None | None | None | I |
F/H | 0.8689 | likely_pathogenic | 0.8734 | pathogenic | -0.956 | Destabilizing | 0.69 | D | 0.51 | neutral | None | None | None | None | I |
F/I | 0.8035 | likely_pathogenic | 0.8131 | pathogenic | -1.096 | Destabilizing | 0.193 | N | 0.459 | neutral | N | 0.477382719 | None | None | I |
F/K | 0.9864 | likely_pathogenic | 0.9876 | pathogenic | -1.726 | Destabilizing | 0.69 | D | 0.594 | neutral | None | None | None | None | I |
F/L | 0.9679 | likely_pathogenic | 0.9663 | pathogenic | -1.096 | Destabilizing | 0.09 | N | 0.449 | neutral | N | 0.505626935 | None | None | I |
F/M | 0.8608 | likely_pathogenic | 0.8583 | pathogenic | -0.838 | Destabilizing | 0.818 | D | 0.416 | neutral | None | None | None | None | I |
F/N | 0.9673 | likely_pathogenic | 0.968 | pathogenic | -2.027 | Highly Destabilizing | 0.818 | D | 0.602 | neutral | None | None | None | None | I |
F/P | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.498 | Destabilizing | 0.932 | D | 0.625 | neutral | None | None | None | None | I |
F/Q | 0.9752 | likely_pathogenic | 0.9761 | pathogenic | -2.004 | Highly Destabilizing | 0.818 | D | 0.616 | neutral | None | None | None | None | I |
F/R | 0.9699 | likely_pathogenic | 0.9715 | pathogenic | -1.145 | Destabilizing | 0.818 | D | 0.604 | neutral | None | None | None | None | I |
F/S | 0.9223 | likely_pathogenic | 0.921 | pathogenic | -2.77 | Highly Destabilizing | 0.324 | N | 0.546 | neutral | N | 0.504173934 | None | None | I |
F/T | 0.9602 | likely_pathogenic | 0.963 | pathogenic | -2.519 | Highly Destabilizing | 0.388 | N | 0.487 | neutral | None | None | None | None | I |
F/V | 0.7478 | likely_pathogenic | 0.7543 | pathogenic | -1.498 | Destabilizing | 0.001 | N | 0.294 | neutral | N | 0.511550042 | None | None | I |
F/W | 0.7498 | likely_pathogenic | 0.7547 | pathogenic | -0.188 | Destabilizing | 0.818 | D | 0.433 | neutral | None | None | None | None | I |
F/Y | 0.2162 | likely_benign | 0.2108 | benign | -0.489 | Destabilizing | None | N | 0.16 | neutral | N | 0.414292854 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.