Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22903 | 68932;68933;68934 | chr2:178577719;178577718;178577717 | chr2:179442446;179442445;179442444 |
N2AB | 21262 | 64009;64010;64011 | chr2:178577719;178577718;178577717 | chr2:179442446;179442445;179442444 |
N2A | 20335 | 61228;61229;61230 | chr2:178577719;178577718;178577717 | chr2:179442446;179442445;179442444 |
N2B | 13838 | 41737;41738;41739 | chr2:178577719;178577718;178577717 | chr2:179442446;179442445;179442444 |
Novex-1 | 13963 | 42112;42113;42114 | chr2:178577719;178577718;178577717 | chr2:179442446;179442445;179442444 |
Novex-2 | 14030 | 42313;42314;42315 | chr2:178577719;178577718;178577717 | chr2:179442446;179442445;179442444 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs754632693 | 0.101 | 0.773 | N | 0.532 | 0.177 | 0.577700112626 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.7E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs754632693 | 0.101 | 0.773 | N | 0.532 | 0.177 | 0.577700112626 | gnomAD-4.0.0 | 4.77643E-06 | None | None | None | None | N | None | 0 | 6.86059E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5833 | likely_pathogenic | 0.6029 | pathogenic | -1.729 | Destabilizing | 0.63 | D | 0.644 | neutral | D | 0.525586493 | None | None | N |
V/C | 0.9313 | likely_pathogenic | 0.9439 | pathogenic | -1.518 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
V/D | 0.9892 | likely_pathogenic | 0.9932 | pathogenic | -1.863 | Destabilizing | 0.975 | D | 0.837 | deleterious | None | None | None | None | N |
V/E | 0.9698 | likely_pathogenic | 0.9774 | pathogenic | -1.603 | Destabilizing | 0.967 | D | 0.819 | deleterious | D | 0.541959969 | None | None | N |
V/F | 0.774 | likely_pathogenic | 0.8218 | pathogenic | -1.006 | Destabilizing | 0.987 | D | 0.762 | deleterious | None | None | None | None | N |
V/G | 0.9071 | likely_pathogenic | 0.9306 | pathogenic | -2.313 | Highly Destabilizing | 0.967 | D | 0.815 | deleterious | D | 0.560064224 | None | None | N |
V/H | 0.9911 | likely_pathogenic | 0.9934 | pathogenic | -2.171 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/I | 0.0903 | likely_benign | 0.0931 | benign | -0.092 | Destabilizing | 0.773 | D | 0.532 | neutral | N | 0.504341643 | None | None | N |
V/K | 0.9828 | likely_pathogenic | 0.9876 | pathogenic | -1.319 | Destabilizing | 0.975 | D | 0.822 | deleterious | None | None | None | None | N |
V/L | 0.5341 | ambiguous | 0.5821 | pathogenic | -0.092 | Destabilizing | 0.63 | D | 0.649 | neutral | N | 0.480697174 | None | None | N |
V/M | 0.51 | ambiguous | 0.543 | ambiguous | -0.345 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/N | 0.9659 | likely_pathogenic | 0.9757 | pathogenic | -1.709 | Destabilizing | 0.975 | D | 0.843 | deleterious | None | None | None | None | N |
V/P | 0.9825 | likely_pathogenic | 0.9871 | pathogenic | -0.609 | Destabilizing | 0.987 | D | 0.823 | deleterious | None | None | None | None | N |
V/Q | 0.9715 | likely_pathogenic | 0.9774 | pathogenic | -1.424 | Destabilizing | 0.987 | D | 0.839 | deleterious | None | None | None | None | N |
V/R | 0.9736 | likely_pathogenic | 0.9803 | pathogenic | -1.446 | Destabilizing | 0.975 | D | 0.838 | deleterious | None | None | None | None | N |
V/S | 0.8832 | likely_pathogenic | 0.9023 | pathogenic | -2.427 | Highly Destabilizing | 0.95 | D | 0.779 | deleterious | None | None | None | None | N |
V/T | 0.7854 | likely_pathogenic | 0.8089 | pathogenic | -1.986 | Destabilizing | 0.033 | N | 0.367 | neutral | None | None | None | None | N |
V/W | 0.9967 | likely_pathogenic | 0.9977 | pathogenic | -1.458 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9765 | likely_pathogenic | 0.9842 | pathogenic | -1.03 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.