Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22905 | 68938;68939;68940 | chr2:178577713;178577712;178577711 | chr2:179442440;179442439;179442438 |
N2AB | 21264 | 64015;64016;64017 | chr2:178577713;178577712;178577711 | chr2:179442440;179442439;179442438 |
N2A | 20337 | 61234;61235;61236 | chr2:178577713;178577712;178577711 | chr2:179442440;179442439;179442438 |
N2B | 13840 | 41743;41744;41745 | chr2:178577713;178577712;178577711 | chr2:179442440;179442439;179442438 |
Novex-1 | 13965 | 42118;42119;42120 | chr2:178577713;178577712;178577711 | chr2:179442440;179442439;179442438 |
Novex-2 | 14032 | 42319;42320;42321 | chr2:178577713;178577712;178577711 | chr2:179442440;179442439;179442438 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.453 | 0.298 | 0.286465849087 | gnomAD-4.0.0 | 2.05317E-06 | None | None | None | None | N | None | 2.98882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.282 | likely_benign | 0.291 | benign | 0.005 | Stabilizing | 1.0 | D | 0.617 | neutral | N | 0.505069574 | None | None | N |
D/C | 0.7876 | likely_pathogenic | 0.801 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
D/E | 0.2331 | likely_benign | 0.2399 | benign | -0.222 | Destabilizing | 1.0 | D | 0.453 | neutral | N | 0.476632179 | None | None | N |
D/F | 0.8497 | likely_pathogenic | 0.856 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
D/G | 0.1565 | likely_benign | 0.1563 | benign | -0.121 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.366285477 | None | None | N |
D/H | 0.4615 | ambiguous | 0.4845 | ambiguous | 0.32 | Stabilizing | 1.0 | D | 0.62 | neutral | N | 0.469861074 | None | None | N |
D/I | 0.774 | likely_pathogenic | 0.7957 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
D/K | 0.628 | likely_pathogenic | 0.6621 | pathogenic | 0.526 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
D/L | 0.6984 | likely_pathogenic | 0.7034 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
D/M | 0.8362 | likely_pathogenic | 0.842 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
D/N | 0.1252 | likely_benign | 0.1223 | benign | 0.339 | Stabilizing | 1.0 | D | 0.648 | neutral | N | 0.437321643 | None | None | N |
D/P | 0.8834 | likely_pathogenic | 0.8948 | pathogenic | 0.2 | Stabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
D/Q | 0.532 | ambiguous | 0.5542 | ambiguous | 0.336 | Stabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
D/R | 0.6716 | likely_pathogenic | 0.7024 | pathogenic | 0.673 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
D/S | 0.1665 | likely_benign | 0.1657 | benign | 0.238 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
D/T | 0.4136 | ambiguous | 0.425 | ambiguous | 0.337 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
D/V | 0.5709 | likely_pathogenic | 0.5938 | pathogenic | 0.2 | Stabilizing | 1.0 | D | 0.621 | neutral | N | 0.511691898 | None | None | N |
D/W | 0.9627 | likely_pathogenic | 0.9662 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
D/Y | 0.4771 | ambiguous | 0.497 | ambiguous | 0.116 | Stabilizing | 1.0 | D | 0.639 | neutral | N | 0.511691898 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.