Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22906 | 68941;68942;68943 | chr2:178577710;178577709;178577708 | chr2:179442437;179442436;179442435 |
N2AB | 21265 | 64018;64019;64020 | chr2:178577710;178577709;178577708 | chr2:179442437;179442436;179442435 |
N2A | 20338 | 61237;61238;61239 | chr2:178577710;178577709;178577708 | chr2:179442437;179442436;179442435 |
N2B | 13841 | 41746;41747;41748 | chr2:178577710;178577709;178577708 | chr2:179442437;179442436;179442435 |
Novex-1 | 13966 | 42121;42122;42123 | chr2:178577710;178577709;178577708 | chr2:179442437;179442436;179442435 |
Novex-2 | 14033 | 42322;42323;42324 | chr2:178577710;178577709;178577708 | chr2:179442437;179442436;179442435 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.869 | 0.865 | 0.891955713682 | gnomAD-4.0.0 | 6.84395E-07 | None | None | None | None | N | None | 2.98882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/I | None | None | 0.999 | D | 0.831 | 0.784 | 0.862389191728 | gnomAD-4.0.0 | 2.05319E-06 | None | None | None | None | N | None | 2.98882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9136 | likely_pathogenic | 0.9251 | pathogenic | -2.411 | Highly Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
L/C | 0.8433 | likely_pathogenic | 0.865 | pathogenic | -2.089 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9989 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/E | 0.9945 | likely_pathogenic | 0.9952 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/F | 0.7957 | likely_pathogenic | 0.8359 | pathogenic | -1.808 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.661725936 | None | None | N |
L/G | 0.9856 | likely_pathogenic | 0.9866 | pathogenic | -2.829 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9876 | likely_pathogenic | 0.9889 | pathogenic | -1.964 | Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.688071265 | None | None | N |
L/I | 0.2813 | likely_benign | 0.3293 | benign | -1.274 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.635178803 | None | None | N |
L/K | 0.9907 | likely_pathogenic | 0.9913 | pathogenic | -1.738 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.3843 | ambiguous | 0.4307 | ambiguous | -1.188 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/N | 0.9894 | likely_pathogenic | 0.9908 | pathogenic | -1.775 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/P | 0.9928 | likely_pathogenic | 0.9945 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.67181974 | None | None | N |
L/Q | 0.9809 | likely_pathogenic | 0.9834 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/R | 0.9778 | likely_pathogenic | 0.9786 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.67181974 | None | None | N |
L/S | 0.9879 | likely_pathogenic | 0.9905 | pathogenic | -2.557 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/T | 0.9094 | likely_pathogenic | 0.9211 | pathogenic | -2.329 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/V | 0.3341 | likely_benign | 0.3697 | ambiguous | -1.626 | Destabilizing | 0.999 | D | 0.84 | deleterious | D | 0.600696993 | None | None | N |
L/W | 0.9859 | likely_pathogenic | 0.9883 | pathogenic | -1.883 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/Y | 0.9814 | likely_pathogenic | 0.985 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.