Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22909 | 68950;68951;68952 | chr2:178577701;178577700;178577699 | chr2:179442428;179442427;179442426 |
N2AB | 21268 | 64027;64028;64029 | chr2:178577701;178577700;178577699 | chr2:179442428;179442427;179442426 |
N2A | 20341 | 61246;61247;61248 | chr2:178577701;178577700;178577699 | chr2:179442428;179442427;179442426 |
N2B | 13844 | 41755;41756;41757 | chr2:178577701;178577700;178577699 | chr2:179442428;179442427;179442426 |
Novex-1 | 13969 | 42130;42131;42132 | chr2:178577701;178577700;178577699 | chr2:179442428;179442427;179442426 |
Novex-2 | 14036 | 42331;42332;42333 | chr2:178577701;178577700;178577699 | chr2:179442428;179442427;179442426 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1229308935 | None | 0.999 | N | 0.774 | 0.516 | 0.323342291347 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93798E-04 | None | 0 | 0 | 0 | 0 | 0 |
G/S | rs1229308935 | None | 0.999 | N | 0.774 | 0.516 | 0.323342291347 | gnomAD-4.0.0 | 6.57696E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.93798E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2978 | likely_benign | 0.3246 | benign | -0.446 | Destabilizing | 0.995 | D | 0.647 | neutral | N | 0.492509049 | None | None | I |
G/C | 0.441 | ambiguous | 0.4983 | ambiguous | -0.94 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.552964334 | None | None | I |
G/D | 0.2082 | likely_benign | 0.2476 | benign | -0.827 | Destabilizing | 0.999 | D | 0.78 | deleterious | N | 0.490839201 | None | None | I |
G/E | 0.3848 | ambiguous | 0.438 | ambiguous | -0.975 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
G/F | 0.7714 | likely_pathogenic | 0.8104 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/H | 0.6056 | likely_pathogenic | 0.65 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/I | 0.7495 | likely_pathogenic | 0.8005 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
G/K | 0.7147 | likely_pathogenic | 0.7621 | pathogenic | -1.098 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | I |
G/L | 0.7176 | likely_pathogenic | 0.7542 | pathogenic | -0.477 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | I |
G/M | 0.7154 | likely_pathogenic | 0.7498 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
G/N | 0.2296 | likely_benign | 0.2536 | benign | -0.712 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
G/P | 0.979 | likely_pathogenic | 0.9845 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
G/Q | 0.5899 | likely_pathogenic | 0.6286 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | I |
G/R | 0.65 | likely_pathogenic | 0.6936 | pathogenic | -0.597 | Destabilizing | 0.777 | D | 0.648 | neutral | D | 0.52519884 | None | None | I |
G/S | 0.1652 | likely_benign | 0.1769 | benign | -0.865 | Destabilizing | 0.999 | D | 0.774 | deleterious | N | 0.493963853 | None | None | I |
G/T | 0.3534 | ambiguous | 0.3958 | ambiguous | -0.946 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | I |
G/V | 0.6169 | likely_pathogenic | 0.6767 | pathogenic | -0.431 | Destabilizing | 0.999 | D | 0.869 | deleterious | D | 0.541101049 | None | None | I |
G/W | 0.6456 | likely_pathogenic | 0.6787 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
G/Y | 0.5593 | ambiguous | 0.6215 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.