Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22916 | 68971;68972;68973 | chr2:178577680;178577679;178577678 | chr2:179442407;179442406;179442405 |
N2AB | 21275 | 64048;64049;64050 | chr2:178577680;178577679;178577678 | chr2:179442407;179442406;179442405 |
N2A | 20348 | 61267;61268;61269 | chr2:178577680;178577679;178577678 | chr2:179442407;179442406;179442405 |
N2B | 13851 | 41776;41777;41778 | chr2:178577680;178577679;178577678 | chr2:179442407;179442406;179442405 |
Novex-1 | 13976 | 42151;42152;42153 | chr2:178577680;178577679;178577678 | chr2:179442407;179442406;179442405 |
Novex-2 | 14043 | 42352;42353;42354 | chr2:178577680;178577679;178577678 | chr2:179442407;179442406;179442405 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.201 | N | 0.634 | 0.587 | 0.606545613963 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8733 | likely_pathogenic | 0.8878 | pathogenic | -3.148 | Highly Destabilizing | 0.25 | N | 0.622 | neutral | None | None | None | None | N |
I/C | 0.8847 | likely_pathogenic | 0.905 | pathogenic | -2.321 | Highly Destabilizing | 0.947 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/D | 0.9986 | likely_pathogenic | 0.9989 | pathogenic | -3.626 | Highly Destabilizing | 0.826 | D | 0.851 | deleterious | None | None | None | None | N |
I/E | 0.9967 | likely_pathogenic | 0.9968 | pathogenic | -3.322 | Highly Destabilizing | 0.826 | D | 0.84 | deleterious | None | None | None | None | N |
I/F | 0.8446 | likely_pathogenic | 0.8632 | pathogenic | -1.735 | Destabilizing | 0.638 | D | 0.606 | neutral | N | 0.517535384 | None | None | N |
I/G | 0.9869 | likely_pathogenic | 0.9884 | pathogenic | -3.713 | Highly Destabilizing | 0.826 | D | 0.833 | deleterious | None | None | None | None | N |
I/H | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -3.19 | Highly Destabilizing | 0.982 | D | 0.845 | deleterious | None | None | None | None | N |
I/K | 0.9954 | likely_pathogenic | 0.9956 | pathogenic | -2.291 | Highly Destabilizing | 0.826 | D | 0.842 | deleterious | None | None | None | None | N |
I/L | 0.4028 | ambiguous | 0.3931 | ambiguous | -1.434 | Destabilizing | 0.043 | N | 0.317 | neutral | N | 0.514057204 | None | None | N |
I/M | 0.5021 | ambiguous | 0.5154 | ambiguous | -1.707 | Destabilizing | 0.638 | D | 0.612 | neutral | N | 0.479769938 | None | None | N |
I/N | 0.9783 | likely_pathogenic | 0.9798 | pathogenic | -2.92 | Highly Destabilizing | 0.916 | D | 0.863 | deleterious | N | 0.518295852 | None | None | N |
I/P | 0.9941 | likely_pathogenic | 0.9947 | pathogenic | -1.999 | Destabilizing | 0.935 | D | 0.865 | deleterious | None | None | None | None | N |
I/Q | 0.9945 | likely_pathogenic | 0.9949 | pathogenic | -2.607 | Highly Destabilizing | 0.935 | D | 0.869 | deleterious | None | None | None | None | N |
I/R | 0.9918 | likely_pathogenic | 0.9924 | pathogenic | -2.214 | Highly Destabilizing | 0.826 | D | 0.865 | deleterious | None | None | None | None | N |
I/S | 0.946 | likely_pathogenic | 0.9502 | pathogenic | -3.473 | Highly Destabilizing | 0.638 | D | 0.754 | deleterious | N | 0.506774963 | None | None | N |
I/T | 0.92 | likely_pathogenic | 0.9235 | pathogenic | -3.024 | Highly Destabilizing | 0.201 | N | 0.634 | neutral | N | 0.506521473 | None | None | N |
I/V | 0.0922 | likely_benign | 0.0874 | benign | -1.999 | Destabilizing | 0.001 | N | 0.188 | neutral | N | 0.329236093 | None | None | N |
I/W | 0.998 | likely_pathogenic | 0.9985 | pathogenic | -2.086 | Highly Destabilizing | 0.982 | D | 0.813 | deleterious | None | None | None | None | N |
I/Y | 0.9865 | likely_pathogenic | 0.9889 | pathogenic | -2.0 | Highly Destabilizing | 0.826 | D | 0.674 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.