Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22919 | 68980;68981;68982 | chr2:178577671;178577670;178577669 | chr2:179442398;179442397;179442396 |
N2AB | 21278 | 64057;64058;64059 | chr2:178577671;178577670;178577669 | chr2:179442398;179442397;179442396 |
N2A | 20351 | 61276;61277;61278 | chr2:178577671;178577670;178577669 | chr2:179442398;179442397;179442396 |
N2B | 13854 | 41785;41786;41787 | chr2:178577671;178577670;178577669 | chr2:179442398;179442397;179442396 |
Novex-1 | 13979 | 42160;42161;42162 | chr2:178577671;178577670;178577669 | chr2:179442398;179442397;179442396 |
Novex-2 | 14046 | 42361;42362;42363 | chr2:178577671;178577670;178577669 | chr2:179442398;179442397;179442396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.025 | N | 0.377 | 0.199 | 0.221734844693 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.914 | likely_pathogenic | 0.9173 | pathogenic | -0.734 | Destabilizing | 0.916 | D | 0.554 | neutral | None | None | None | None | N |
K/C | 0.9067 | likely_pathogenic | 0.9137 | pathogenic | -1.204 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/D | 0.9924 | likely_pathogenic | 0.9933 | pathogenic | -0.822 | Destabilizing | 0.845 | D | 0.598 | neutral | None | None | None | None | N |
K/E | 0.789 | likely_pathogenic | 0.7989 | pathogenic | -0.733 | Destabilizing | 0.025 | N | 0.377 | neutral | N | 0.483520866 | None | None | N |
K/F | 0.9749 | likely_pathogenic | 0.9784 | pathogenic | -0.911 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
K/G | 0.9585 | likely_pathogenic | 0.9616 | pathogenic | -1.034 | Destabilizing | 0.916 | D | 0.638 | neutral | None | None | None | None | N |
K/H | 0.7736 | likely_pathogenic | 0.7708 | pathogenic | -1.451 | Destabilizing | 0.997 | D | 0.673 | neutral | None | None | None | None | N |
K/I | 0.7898 | likely_pathogenic | 0.7992 | pathogenic | 0.023 | Stabilizing | 0.987 | D | 0.763 | deleterious | None | None | None | None | N |
K/L | 0.8523 | likely_pathogenic | 0.8452 | pathogenic | 0.023 | Stabilizing | 0.975 | D | 0.669 | neutral | None | None | None | None | N |
K/M | 0.7057 | likely_pathogenic | 0.7046 | pathogenic | 0.029 | Stabilizing | 0.999 | D | 0.654 | neutral | N | 0.47687574 | None | None | N |
K/N | 0.9742 | likely_pathogenic | 0.9759 | pathogenic | -0.731 | Destabilizing | 0.967 | D | 0.579 | neutral | N | 0.481408417 | None | None | N |
K/P | 0.9957 | likely_pathogenic | 0.9955 | pathogenic | -0.202 | Destabilizing | 0.987 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Q | 0.4189 | ambiguous | 0.4228 | ambiguous | -0.981 | Destabilizing | 0.935 | D | 0.585 | neutral | N | 0.471898536 | None | None | N |
K/R | 0.0903 | likely_benign | 0.0901 | benign | -0.495 | Destabilizing | 0.056 | N | 0.354 | neutral | N | 0.457891703 | None | None | N |
K/S | 0.9554 | likely_pathogenic | 0.9572 | pathogenic | -1.373 | Destabilizing | 0.916 | D | 0.489 | neutral | None | None | None | None | N |
K/T | 0.7556 | likely_pathogenic | 0.7664 | pathogenic | -1.094 | Destabilizing | 0.967 | D | 0.669 | neutral | N | 0.521231105 | None | None | N |
K/V | 0.7029 | likely_pathogenic | 0.7212 | pathogenic | -0.202 | Destabilizing | 0.987 | D | 0.673 | neutral | None | None | None | None | N |
K/W | 0.944 | likely_pathogenic | 0.9479 | pathogenic | -0.798 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/Y | 0.9356 | likely_pathogenic | 0.9434 | pathogenic | -0.37 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.