Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22922 | 68989;68990;68991 | chr2:178577662;178577661;178577660 | chr2:179442389;179442388;179442387 |
N2AB | 21281 | 64066;64067;64068 | chr2:178577662;178577661;178577660 | chr2:179442389;179442388;179442387 |
N2A | 20354 | 61285;61286;61287 | chr2:178577662;178577661;178577660 | chr2:179442389;179442388;179442387 |
N2B | 13857 | 41794;41795;41796 | chr2:178577662;178577661;178577660 | chr2:179442389;179442388;179442387 |
Novex-1 | 13982 | 42169;42170;42171 | chr2:178577662;178577661;178577660 | chr2:179442389;179442388;179442387 |
Novex-2 | 14049 | 42370;42371;42372 | chr2:178577662;178577661;178577660 | chr2:179442389;179442388;179442387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs367924146 | None | 0.797 | N | 0.541 | 0.199 | 0.367425347029 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.803 | likely_pathogenic | 0.7434 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
A/D | 0.9742 | likely_pathogenic | 0.9437 | pathogenic | -0.822 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | I |
A/E | 0.9533 | likely_pathogenic | 0.9057 | pathogenic | -0.994 | Destabilizing | 0.998 | D | 0.778 | deleterious | N | 0.493827906 | None | None | I |
A/F | 0.805 | likely_pathogenic | 0.7381 | pathogenic | -0.995 | Destabilizing | 0.991 | D | 0.84 | deleterious | None | None | None | None | I |
A/G | 0.6094 | likely_pathogenic | 0.4874 | ambiguous | -0.276 | Destabilizing | 0.979 | D | 0.654 | neutral | N | 0.497195267 | None | None | I |
A/H | 0.9371 | likely_pathogenic | 0.8986 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
A/I | 0.6303 | likely_pathogenic | 0.5454 | ambiguous | -0.392 | Destabilizing | 0.18 | N | 0.461 | neutral | None | None | None | None | I |
A/K | 0.9728 | likely_pathogenic | 0.9418 | pathogenic | -0.618 | Destabilizing | 0.995 | D | 0.779 | deleterious | None | None | None | None | I |
A/L | 0.5925 | likely_pathogenic | 0.4788 | ambiguous | -0.392 | Destabilizing | 0.839 | D | 0.512 | neutral | None | None | None | None | I |
A/M | 0.6784 | likely_pathogenic | 0.5598 | ambiguous | -0.34 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | I |
A/N | 0.8834 | likely_pathogenic | 0.8224 | pathogenic | -0.233 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | I |
A/P | 0.9652 | likely_pathogenic | 0.944 | pathogenic | -0.315 | Destabilizing | 0.998 | D | 0.79 | deleterious | D | 0.545826947 | None | None | I |
A/Q | 0.8827 | likely_pathogenic | 0.8261 | pathogenic | -0.582 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | I |
A/R | 0.9142 | likely_pathogenic | 0.8525 | pathogenic | -0.06 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | I |
A/S | 0.2956 | likely_benign | 0.2289 | benign | -0.352 | Destabilizing | 0.979 | D | 0.64 | neutral | N | 0.494779412 | None | None | I |
A/T | 0.5086 | ambiguous | 0.3645 | ambiguous | -0.46 | Destabilizing | 0.988 | D | 0.785 | deleterious | N | 0.515352429 | None | None | I |
A/V | 0.3373 | likely_benign | 0.2612 | benign | -0.315 | Destabilizing | 0.797 | D | 0.541 | neutral | N | 0.466671523 | None | None | I |
A/W | 0.973 | likely_pathogenic | 0.9596 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
A/Y | 0.9181 | likely_pathogenic | 0.8788 | pathogenic | -0.774 | Destabilizing | 0.995 | D | 0.844 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.