Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22925 | 68998;68999;69000 | chr2:178577653;178577652;178577651 | chr2:179442380;179442379;179442378 |
N2AB | 21284 | 64075;64076;64077 | chr2:178577653;178577652;178577651 | chr2:179442380;179442379;179442378 |
N2A | 20357 | 61294;61295;61296 | chr2:178577653;178577652;178577651 | chr2:179442380;179442379;179442378 |
N2B | 13860 | 41803;41804;41805 | chr2:178577653;178577652;178577651 | chr2:179442380;179442379;179442378 |
Novex-1 | 13985 | 42178;42179;42180 | chr2:178577653;178577652;178577651 | chr2:179442380;179442379;179442378 |
Novex-2 | 14052 | 42379;42380;42381 | chr2:178577653;178577652;178577651 | chr2:179442380;179442379;179442378 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.025 | N | 0.292 | 0.087 | 0.463843524616 | gnomAD-4.0.0 | 1.59295E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43451E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5839 | likely_pathogenic | 0.5845 | pathogenic | -1.178 | Destabilizing | 0.559 | D | 0.649 | neutral | None | None | None | None | N |
I/C | 0.7923 | likely_pathogenic | 0.806 | pathogenic | -0.84 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
I/D | 0.9196 | likely_pathogenic | 0.9092 | pathogenic | -0.35 | Destabilizing | 0.956 | D | 0.845 | deleterious | None | None | None | None | N |
I/E | 0.8406 | likely_pathogenic | 0.8311 | pathogenic | -0.394 | Destabilizing | 0.956 | D | 0.841 | deleterious | None | None | None | None | N |
I/F | 0.2085 | likely_benign | 0.2226 | benign | -0.876 | Destabilizing | 0.97 | D | 0.725 | prob.delet. | N | 0.493295143 | None | None | N |
I/G | 0.8667 | likely_pathogenic | 0.8612 | pathogenic | -1.433 | Destabilizing | 0.956 | D | 0.822 | deleterious | None | None | None | None | N |
I/H | 0.7865 | likely_pathogenic | 0.7822 | pathogenic | -0.558 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
I/K | 0.7822 | likely_pathogenic | 0.773 | pathogenic | -0.693 | Destabilizing | 0.956 | D | 0.843 | deleterious | None | None | None | None | N |
I/L | 0.132 | likely_benign | 0.1393 | benign | -0.591 | Destabilizing | 0.294 | N | 0.407 | neutral | N | 0.482731432 | None | None | N |
I/M | 0.1557 | likely_benign | 0.1614 | benign | -0.528 | Destabilizing | 0.97 | D | 0.719 | prob.delet. | N | 0.482738317 | None | None | N |
I/N | 0.6086 | likely_pathogenic | 0.5767 | pathogenic | -0.481 | Destabilizing | 0.942 | D | 0.851 | deleterious | N | 0.506701467 | None | None | N |
I/P | 0.9105 | likely_pathogenic | 0.9012 | pathogenic | -0.753 | Destabilizing | 0.978 | D | 0.851 | deleterious | None | None | None | None | N |
I/Q | 0.7523 | likely_pathogenic | 0.7518 | pathogenic | -0.685 | Destabilizing | 0.978 | D | 0.854 | deleterious | None | None | None | None | N |
I/R | 0.7155 | likely_pathogenic | 0.7077 | pathogenic | -0.095 | Destabilizing | 0.956 | D | 0.851 | deleterious | None | None | None | None | N |
I/S | 0.5878 | likely_pathogenic | 0.5561 | ambiguous | -1.085 | Destabilizing | 0.698 | D | 0.787 | deleterious | N | 0.457219699 | None | None | N |
I/T | 0.4711 | ambiguous | 0.4182 | ambiguous | -1.01 | Destabilizing | 0.014 | N | 0.449 | neutral | N | 0.48096389 | None | None | N |
I/V | 0.0722 | likely_benign | 0.0693 | benign | -0.753 | Destabilizing | 0.025 | N | 0.292 | neutral | N | 0.458835852 | None | None | N |
I/W | 0.8569 | likely_pathogenic | 0.8712 | pathogenic | -0.867 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | N |
I/Y | 0.6553 | likely_pathogenic | 0.6738 | pathogenic | -0.647 | Destabilizing | 0.993 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.