Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22932 | 69019;69020;69021 | chr2:178577632;178577631;178577630 | chr2:179442359;179442358;179442357 |
N2AB | 21291 | 64096;64097;64098 | chr2:178577632;178577631;178577630 | chr2:179442359;179442358;179442357 |
N2A | 20364 | 61315;61316;61317 | chr2:178577632;178577631;178577630 | chr2:179442359;179442358;179442357 |
N2B | 13867 | 41824;41825;41826 | chr2:178577632;178577631;178577630 | chr2:179442359;179442358;179442357 |
Novex-1 | 13992 | 42199;42200;42201 | chr2:178577632;178577631;178577630 | chr2:179442359;179442358;179442357 |
Novex-2 | 14059 | 42400;42401;42402 | chr2:178577632;178577631;178577630 | chr2:179442359;179442358;179442357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.914 | N | 0.411 | 0.179 | 0.201204373187 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.251 | likely_benign | 0.2637 | benign | -1.213 | Destabilizing | 0.914 | D | 0.386 | neutral | N | 0.502618496 | None | None | I |
T/C | 0.7413 | likely_pathogenic | 0.7727 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | I |
T/D | 0.9102 | likely_pathogenic | 0.923 | pathogenic | -0.82 | Destabilizing | 0.99 | D | 0.604 | neutral | None | None | None | None | I |
T/E | 0.9097 | likely_pathogenic | 0.9282 | pathogenic | -0.681 | Destabilizing | 0.98 | D | 0.605 | neutral | None | None | None | None | I |
T/F | 0.904 | likely_pathogenic | 0.9225 | pathogenic | -0.866 | Destabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | I |
T/G | 0.5 | ambiguous | 0.5083 | ambiguous | -1.601 | Destabilizing | 0.98 | D | 0.49 | neutral | None | None | None | None | I |
T/H | 0.8919 | likely_pathogenic | 0.9102 | pathogenic | -1.642 | Destabilizing | 0.997 | D | 0.521 | neutral | None | None | None | None | I |
T/I | 0.7624 | likely_pathogenic | 0.7964 | pathogenic | -0.216 | Destabilizing | 0.987 | D | 0.591 | neutral | N | 0.505327521 | None | None | I |
T/K | 0.883 | likely_pathogenic | 0.8992 | pathogenic | -0.657 | Destabilizing | 0.841 | D | 0.611 | neutral | N | 0.510380404 | None | None | I |
T/L | 0.4377 | ambiguous | 0.4631 | ambiguous | -0.216 | Destabilizing | 0.933 | D | 0.61 | neutral | None | None | None | None | I |
T/M | 0.3073 | likely_benign | 0.3432 | ambiguous | -0.126 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | I |
T/N | 0.626 | likely_pathogenic | 0.6592 | pathogenic | -1.032 | Destabilizing | 0.98 | D | 0.572 | neutral | None | None | None | None | I |
T/P | 0.6241 | likely_pathogenic | 0.6364 | pathogenic | -0.516 | Destabilizing | 0.996 | D | 0.571 | neutral | N | 0.496252621 | None | None | I |
T/Q | 0.832 | likely_pathogenic | 0.8607 | pathogenic | -0.966 | Destabilizing | 0.98 | D | 0.571 | neutral | None | None | None | None | I |
T/R | 0.8428 | likely_pathogenic | 0.864 | pathogenic | -0.673 | Destabilizing | 0.071 | N | 0.326 | neutral | N | 0.521990199 | None | None | I |
T/S | 0.1881 | likely_benign | 0.1974 | benign | -1.387 | Destabilizing | 0.914 | D | 0.411 | neutral | N | 0.446187134 | None | None | I |
T/V | 0.5225 | ambiguous | 0.5526 | ambiguous | -0.516 | Destabilizing | 0.966 | D | 0.553 | neutral | None | None | None | None | I |
T/W | 0.9766 | likely_pathogenic | 0.9823 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | I |
T/Y | 0.941 | likely_pathogenic | 0.9549 | pathogenic | -0.554 | Destabilizing | 0.997 | D | 0.534 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.