Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22934 | 69025;69026;69027 | chr2:178577626;178577625;178577624 | chr2:179442353;179442352;179442351 |
N2AB | 21293 | 64102;64103;64104 | chr2:178577626;178577625;178577624 | chr2:179442353;179442352;179442351 |
N2A | 20366 | 61321;61322;61323 | chr2:178577626;178577625;178577624 | chr2:179442353;179442352;179442351 |
N2B | 13869 | 41830;41831;41832 | chr2:178577626;178577625;178577624 | chr2:179442353;179442352;179442351 |
Novex-1 | 13994 | 42205;42206;42207 | chr2:178577626;178577625;178577624 | chr2:179442353;179442352;179442351 |
Novex-2 | 14061 | 42406;42407;42408 | chr2:178577626;178577625;178577624 | chr2:179442353;179442352;179442351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs749399592 | -0.755 | 0.001 | N | 0.153 | 0.108 | None | gnomAD-2.1.1 | 8.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
T/A | rs749399592 | -0.755 | 0.001 | N | 0.153 | 0.108 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs749399592 | -0.755 | 0.001 | N | 0.153 | 0.108 | None | gnomAD-4.0.0 | 3.59995E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.92071E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0658 | likely_benign | 0.0664 | benign | -0.462 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.408455465 | None | None | N |
T/C | 0.342 | ambiguous | 0.3618 | ambiguous | -0.408 | Destabilizing | 0.967 | D | 0.569 | neutral | None | None | None | None | N |
T/D | 0.2941 | likely_benign | 0.3004 | benign | 0.324 | Stabilizing | 0.691 | D | 0.643 | neutral | None | None | None | None | N |
T/E | 0.2235 | likely_benign | 0.2302 | benign | 0.299 | Stabilizing | 0.524 | D | 0.633 | neutral | None | None | None | None | N |
T/F | 0.2514 | likely_benign | 0.2558 | benign | -0.66 | Destabilizing | 0.003 | N | 0.467 | neutral | None | None | None | None | N |
T/G | 0.2174 | likely_benign | 0.2135 | benign | -0.672 | Destabilizing | 0.355 | N | 0.601 | neutral | None | None | None | None | N |
T/H | 0.2688 | likely_benign | 0.2658 | benign | -0.83 | Destabilizing | 0.989 | D | 0.615 | neutral | None | None | None | None | N |
T/I | 0.144 | likely_benign | 0.1392 | benign | -0.015 | Destabilizing | 0.294 | N | 0.616 | neutral | N | 0.51606572 | None | None | N |
T/K | 0.2225 | likely_benign | 0.2186 | benign | -0.451 | Destabilizing | 0.524 | D | 0.626 | neutral | None | None | None | None | N |
T/L | 0.0998 | likely_benign | 0.0991 | benign | -0.015 | Destabilizing | 0.001 | N | 0.256 | neutral | None | None | None | None | N |
T/M | 0.0835 | likely_benign | 0.0817 | benign | -0.015 | Destabilizing | 0.794 | D | 0.595 | neutral | None | None | None | None | N |
T/N | 0.0954 | likely_benign | 0.0963 | benign | -0.342 | Destabilizing | 0.855 | D | 0.545 | neutral | N | 0.50869703 | None | None | N |
T/P | 0.0755 | likely_benign | 0.0733 | benign | -0.132 | Destabilizing | 0.003 | N | 0.376 | neutral | N | 0.379634068 | None | None | N |
T/Q | 0.2141 | likely_benign | 0.2115 | benign | -0.476 | Destabilizing | 0.887 | D | 0.614 | neutral | None | None | None | None | N |
T/R | 0.1991 | likely_benign | 0.1945 | benign | -0.208 | Destabilizing | 0.887 | D | 0.649 | prob.neutral | None | None | None | None | N |
T/S | 0.1051 | likely_benign | 0.1049 | benign | -0.631 | Destabilizing | 0.146 | N | 0.468 | neutral | N | 0.467599769 | None | None | N |
T/V | 0.1166 | likely_benign | 0.1141 | benign | -0.132 | Destabilizing | 0.185 | N | 0.42 | neutral | None | None | None | None | N |
T/W | 0.5944 | likely_pathogenic | 0.6012 | pathogenic | -0.641 | Destabilizing | 0.989 | D | 0.639 | neutral | None | None | None | None | N |
T/Y | 0.2436 | likely_benign | 0.2614 | benign | -0.377 | Destabilizing | 0.659 | D | 0.653 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.