Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22938 | 69037;69038;69039 | chr2:178577614;178577613;178577612 | chr2:179442341;179442340;179442339 |
N2AB | 21297 | 64114;64115;64116 | chr2:178577614;178577613;178577612 | chr2:179442341;179442340;179442339 |
N2A | 20370 | 61333;61334;61335 | chr2:178577614;178577613;178577612 | chr2:179442341;179442340;179442339 |
N2B | 13873 | 41842;41843;41844 | chr2:178577614;178577613;178577612 | chr2:179442341;179442340;179442339 |
Novex-1 | 13998 | 42217;42218;42219 | chr2:178577614;178577613;178577612 | chr2:179442341;179442340;179442339 |
Novex-2 | 14065 | 42418;42419;42420 | chr2:178577614;178577613;178577612 | chr2:179442341;179442340;179442339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs2046738934 | None | 0.994 | N | 0.634 | 0.302 | 0.298403945805 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/M | rs2046738934 | None | 0.994 | N | 0.634 | 0.302 | 0.298403945805 | gnomAD-4.0.0 | 3.88038E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.23917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5684 | likely_pathogenic | 0.6425 | pathogenic | -0.377 | Destabilizing | 0.797 | D | 0.543 | neutral | None | None | None | None | N |
K/C | 0.7623 | likely_pathogenic | 0.817 | pathogenic | -0.426 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
K/D | 0.8408 | likely_pathogenic | 0.8842 | pathogenic | -0.109 | Destabilizing | 0.965 | D | 0.651 | prob.neutral | None | None | None | None | N |
K/E | 0.2784 | likely_benign | 0.32 | benign | -0.043 | Destabilizing | 0.748 | D | 0.493 | neutral | N | 0.469212283 | None | None | N |
K/F | 0.8997 | likely_pathogenic | 0.9271 | pathogenic | -0.274 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
K/G | 0.7292 | likely_pathogenic | 0.7939 | pathogenic | -0.695 | Destabilizing | 0.965 | D | 0.582 | neutral | None | None | None | None | N |
K/H | 0.3806 | ambiguous | 0.4251 | ambiguous | -1.108 | Destabilizing | 0.99 | D | 0.637 | neutral | None | None | None | None | N |
K/I | 0.5223 | ambiguous | 0.5838 | pathogenic | 0.419 | Stabilizing | 0.982 | D | 0.798 | deleterious | None | None | None | None | N |
K/L | 0.5447 | ambiguous | 0.5934 | pathogenic | 0.419 | Stabilizing | 0.965 | D | 0.582 | neutral | None | None | None | None | N |
K/M | 0.3626 | ambiguous | 0.4148 | ambiguous | 0.358 | Stabilizing | 0.994 | D | 0.634 | neutral | N | 0.469465773 | None | None | N |
K/N | 0.6976 | likely_pathogenic | 0.7704 | pathogenic | -0.231 | Destabilizing | 0.954 | D | 0.674 | prob.neutral | N | 0.503788178 | None | None | N |
K/P | 0.9707 | likely_pathogenic | 0.9794 | pathogenic | 0.184 | Stabilizing | 0.982 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/Q | 0.1603 | likely_benign | 0.1788 | benign | -0.388 | Destabilizing | 0.155 | N | 0.23 | neutral | N | 0.516302501 | None | None | N |
K/R | 0.0831 | likely_benign | 0.0864 | benign | -0.466 | Destabilizing | 0.748 | D | 0.539 | neutral | N | 0.463486737 | None | None | N |
K/S | 0.6272 | likely_pathogenic | 0.6987 | pathogenic | -0.838 | Destabilizing | 0.797 | D | 0.619 | neutral | None | None | None | None | N |
K/T | 0.2859 | likely_benign | 0.3338 | benign | -0.582 | Destabilizing | 0.954 | D | 0.655 | prob.neutral | N | 0.509373742 | None | None | N |
K/V | 0.4697 | ambiguous | 0.5145 | ambiguous | 0.184 | Stabilizing | 0.965 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/W | 0.8585 | likely_pathogenic | 0.8912 | pathogenic | -0.165 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
K/Y | 0.8082 | likely_pathogenic | 0.8513 | pathogenic | 0.145 | Stabilizing | 0.982 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.