Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22939 | 69040;69041;69042 | chr2:178577611;178577610;178577609 | chr2:179442338;179442337;179442336 |
N2AB | 21298 | 64117;64118;64119 | chr2:178577611;178577610;178577609 | chr2:179442338;179442337;179442336 |
N2A | 20371 | 61336;61337;61338 | chr2:178577611;178577610;178577609 | chr2:179442338;179442337;179442336 |
N2B | 13874 | 41845;41846;41847 | chr2:178577611;178577610;178577609 | chr2:179442338;179442337;179442336 |
Novex-1 | 13999 | 42220;42221;42222 | chr2:178577611;178577610;178577609 | chr2:179442338;179442337;179442336 |
Novex-2 | 14066 | 42421;42422;42423 | chr2:178577611;178577610;178577609 | chr2:179442338;179442337;179442336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.032 | N | 0.385 | 0.288 | 0.215109475489 | gnomAD-4.0.0 | 6.87923E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02415E-07 | 0 | 0 |
D/V | None | None | 0.987 | N | 0.708 | 0.482 | 0.467669411796 | gnomAD-4.0.0 | 1.37585E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80483E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7628 | likely_pathogenic | 0.7954 | pathogenic | -0.29 | Destabilizing | 0.841 | D | 0.573 | neutral | N | 0.51543571 | None | None | N |
D/C | 0.9841 | likely_pathogenic | 0.9882 | pathogenic | 0.07 | Stabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
D/E | 0.6076 | likely_pathogenic | 0.6506 | pathogenic | -0.428 | Destabilizing | 0.955 | D | 0.433 | neutral | N | 0.499082178 | None | None | N |
D/F | 0.9824 | likely_pathogenic | 0.986 | pathogenic | -0.359 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
D/G | 0.7686 | likely_pathogenic | 0.8085 | pathogenic | -0.485 | Destabilizing | 0.032 | N | 0.385 | neutral | N | 0.476819152 | None | None | N |
D/H | 0.9322 | likely_pathogenic | 0.9485 | pathogenic | -0.334 | Destabilizing | 0.999 | D | 0.826 | deleterious | N | 0.488340042 | None | None | N |
D/I | 0.9597 | likely_pathogenic | 0.9697 | pathogenic | 0.176 | Stabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
D/K | 0.9568 | likely_pathogenic | 0.9647 | pathogenic | 0.187 | Stabilizing | 0.98 | D | 0.786 | deleterious | None | None | None | None | N |
D/L | 0.9392 | likely_pathogenic | 0.9484 | pathogenic | 0.176 | Stabilizing | 0.99 | D | 0.705 | prob.delet. | None | None | None | None | N |
D/M | 0.9729 | likely_pathogenic | 0.9786 | pathogenic | 0.379 | Stabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
D/N | 0.4981 | ambiguous | 0.5845 | pathogenic | -0.004 | Destabilizing | 0.974 | D | 0.761 | deleterious | N | 0.472464286 | None | None | N |
D/P | 0.9658 | likely_pathogenic | 0.9772 | pathogenic | 0.043 | Stabilizing | 0.997 | D | 0.772 | deleterious | None | None | None | None | N |
D/Q | 0.9344 | likely_pathogenic | 0.947 | pathogenic | 0.006 | Stabilizing | 0.997 | D | 0.774 | deleterious | None | None | None | None | N |
D/R | 0.9658 | likely_pathogenic | 0.9708 | pathogenic | 0.295 | Stabilizing | 0.99 | D | 0.768 | deleterious | None | None | None | None | N |
D/S | 0.6869 | likely_pathogenic | 0.7381 | pathogenic | -0.123 | Destabilizing | 0.933 | D | 0.697 | prob.delet. | None | None | None | None | N |
D/T | 0.8828 | likely_pathogenic | 0.914 | pathogenic | 0.019 | Stabilizing | 0.99 | D | 0.787 | deleterious | None | None | None | None | N |
D/V | 0.8814 | likely_pathogenic | 0.905 | pathogenic | 0.043 | Stabilizing | 0.987 | D | 0.708 | prob.delet. | N | 0.505012265 | None | None | N |
D/W | 0.9948 | likely_pathogenic | 0.9955 | pathogenic | -0.275 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
D/Y | 0.8392 | likely_pathogenic | 0.8693 | pathogenic | -0.14 | Destabilizing | 0.999 | D | 0.789 | deleterious | N | 0.506279713 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.