Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22950 | 69073;69074;69075 | chr2:178577487;178577486;178577485 | chr2:179442214;179442213;179442212 |
N2AB | 21309 | 64150;64151;64152 | chr2:178577487;178577486;178577485 | chr2:179442214;179442213;179442212 |
N2A | 20382 | 61369;61370;61371 | chr2:178577487;178577486;178577485 | chr2:179442214;179442213;179442212 |
N2B | 13885 | 41878;41879;41880 | chr2:178577487;178577486;178577485 | chr2:179442214;179442213;179442212 |
Novex-1 | 14010 | 42253;42254;42255 | chr2:178577487;178577486;178577485 | chr2:179442214;179442213;179442212 |
Novex-2 | 14077 | 42454;42455;42456 | chr2:178577487;178577486;178577485 | chr2:179442214;179442213;179442212 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs770007899 | -0.921 | 0.491 | N | 0.377 | 0.226 | 0.307966526162 | gnomAD-2.1.1 | 2.1E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.82358E-04 | None | 0 | None | 0 | 0 | 0 |
P/T | rs770007899 | -0.921 | 0.491 | N | 0.377 | 0.226 | 0.307966526162 | gnomAD-4.0.0 | 4.17234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.53178E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1065 | likely_benign | 0.0939 | benign | -0.408 | Destabilizing | 0.013 | N | 0.2 | neutral | N | 0.474467246 | None | None | N |
P/C | 0.6499 | likely_pathogenic | 0.5941 | pathogenic | -0.855 | Destabilizing | 0.991 | D | 0.488 | neutral | None | None | None | None | N |
P/D | 0.4068 | ambiguous | 0.353 | ambiguous | -0.312 | Destabilizing | 0.004 | N | 0.216 | neutral | None | None | None | None | N |
P/E | 0.2884 | likely_benign | 0.2575 | benign | -0.41 | Destabilizing | 0.017 | N | 0.21 | neutral | None | None | None | None | N |
P/F | 0.6665 | likely_pathogenic | 0.6005 | pathogenic | -0.713 | Destabilizing | 0.818 | D | 0.501 | neutral | None | None | None | None | N |
P/G | 0.3541 | ambiguous | 0.3282 | benign | -0.475 | Destabilizing | 0.345 | N | 0.406 | neutral | None | None | None | None | N |
P/H | 0.2455 | likely_benign | 0.2051 | benign | 0.002 | Stabilizing | 0.873 | D | 0.46 | neutral | N | 0.514294851 | None | None | N |
P/I | 0.4378 | ambiguous | 0.3793 | ambiguous | -0.362 | Destabilizing | 0.39 | N | 0.456 | neutral | None | None | None | None | N |
P/K | 0.3052 | likely_benign | 0.2655 | benign | -0.434 | Destabilizing | 0.39 | N | 0.375 | neutral | None | None | None | None | N |
P/L | 0.2028 | likely_benign | 0.1716 | benign | -0.362 | Destabilizing | 0.326 | N | 0.422 | neutral | N | 0.513081343 | None | None | N |
P/M | 0.3981 | ambiguous | 0.3425 | ambiguous | -0.703 | Destabilizing | 0.901 | D | 0.465 | neutral | None | None | None | None | N |
P/N | 0.3262 | likely_benign | 0.2905 | benign | -0.274 | Destabilizing | 0.561 | D | 0.433 | neutral | None | None | None | None | N |
P/Q | 0.1886 | likely_benign | 0.1646 | benign | -0.444 | Destabilizing | 0.017 | N | 0.224 | neutral | None | None | None | None | N |
P/R | 0.2334 | likely_benign | 0.2069 | benign | -0.018 | Destabilizing | 0.326 | N | 0.47 | neutral | N | 0.475734694 | None | None | N |
P/S | 0.1425 | likely_benign | 0.1271 | benign | -0.595 | Destabilizing | 0.166 | N | 0.373 | neutral | N | 0.475481205 | None | None | N |
P/T | 0.1308 | likely_benign | 0.112 | benign | -0.601 | Destabilizing | 0.491 | N | 0.377 | neutral | N | 0.475481205 | None | None | N |
P/V | 0.2874 | likely_benign | 0.245 | benign | -0.351 | Destabilizing | 0.004 | N | 0.342 | neutral | None | None | None | None | N |
P/W | 0.7682 | likely_pathogenic | 0.7278 | pathogenic | -0.763 | Destabilizing | 0.991 | D | 0.544 | neutral | None | None | None | None | N |
P/Y | 0.5552 | ambiguous | 0.4981 | ambiguous | -0.509 | Destabilizing | 0.901 | D | 0.5 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.