Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22963 | 69112;69113;69114 | chr2:178577448;178577447;178577446 | chr2:179442175;179442174;179442173 |
N2AB | 21322 | 64189;64190;64191 | chr2:178577448;178577447;178577446 | chr2:179442175;179442174;179442173 |
N2A | 20395 | 61408;61409;61410 | chr2:178577448;178577447;178577446 | chr2:179442175;179442174;179442173 |
N2B | 13898 | 41917;41918;41919 | chr2:178577448;178577447;178577446 | chr2:179442175;179442174;179442173 |
Novex-1 | 14023 | 42292;42293;42294 | chr2:178577448;178577447;178577446 | chr2:179442175;179442174;179442173 |
Novex-2 | 14090 | 42493;42494;42495 | chr2:178577448;178577447;178577446 | chr2:179442175;179442174;179442173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs771761816 | -0.547 | 0.638 | N | 0.429 | 0.317 | 0.327419511103 | gnomAD-2.1.1 | 4.46E-05 | None | None | None | None | I | None | 0 | 2.90529E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67448E-04 |
T/P | rs771761816 | -0.547 | 0.638 | N | 0.429 | 0.317 | 0.327419511103 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs771761816 | -0.547 | 0.638 | N | 0.429 | 0.317 | 0.327419511103 | gnomAD-4.0.0 | 1.12024E-05 | None | None | None | None | I | None | 1.33469E-05 | 2.33754E-04 | None | 0 | 0 | None | 0 | 0 | 2.55204E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0913 | likely_benign | 0.0923 | benign | -0.894 | Destabilizing | 0.094 | N | 0.431 | neutral | N | 0.489283684 | None | None | I |
T/C | 0.4123 | ambiguous | 0.4363 | ambiguous | -0.551 | Destabilizing | 0.947 | D | 0.474 | neutral | None | None | None | None | I |
T/D | 0.3237 | likely_benign | 0.3426 | ambiguous | -0.053 | Destabilizing | 0.25 | N | 0.397 | neutral | None | None | None | None | I |
T/E | 0.3617 | ambiguous | 0.375 | ambiguous | -0.025 | Destabilizing | 0.25 | N | 0.387 | neutral | None | None | None | None | I |
T/F | 0.3606 | ambiguous | 0.349 | ambiguous | -0.906 | Destabilizing | 0.826 | D | 0.568 | neutral | None | None | None | None | I |
T/G | 0.286 | likely_benign | 0.2992 | benign | -1.178 | Destabilizing | 0.25 | N | 0.455 | neutral | None | None | None | None | I |
T/H | 0.3118 | likely_benign | 0.3132 | benign | -1.381 | Destabilizing | 0.898 | D | 0.567 | neutral | None | None | None | None | I |
T/I | 0.2166 | likely_benign | 0.1909 | benign | -0.22 | Destabilizing | 0.638 | D | 0.432 | neutral | N | 0.472545829 | None | None | I |
T/K | 0.3124 | likely_benign | 0.3231 | benign | -0.64 | Destabilizing | 0.25 | N | 0.41 | neutral | None | None | None | None | I |
T/L | 0.141 | likely_benign | 0.1292 | benign | -0.22 | Destabilizing | 0.399 | N | 0.403 | neutral | None | None | None | None | I |
T/M | 0.1066 | likely_benign | 0.1018 | benign | 0.019 | Stabilizing | 0.982 | D | 0.448 | neutral | None | None | None | None | I |
T/N | 0.0991 | likely_benign | 0.1034 | benign | -0.678 | Destabilizing | 0.004 | N | 0.267 | neutral | N | 0.500095324 | None | None | I |
T/P | 0.1511 | likely_benign | 0.1504 | benign | -0.412 | Destabilizing | 0.638 | D | 0.429 | neutral | N | 0.489859688 | None | None | I |
T/Q | 0.304 | likely_benign | 0.3117 | benign | -0.777 | Destabilizing | 0.7 | D | 0.439 | neutral | None | None | None | None | I |
T/R | 0.2816 | likely_benign | 0.2987 | benign | -0.472 | Destabilizing | 0.7 | D | 0.44 | neutral | None | None | None | None | I |
T/S | 0.1028 | likely_benign | 0.1074 | benign | -1.021 | Destabilizing | 0.002 | N | 0.263 | neutral | N | 0.482912286 | None | None | I |
T/V | 0.1533 | likely_benign | 0.1369 | benign | -0.412 | Destabilizing | 0.399 | N | 0.403 | neutral | None | None | None | None | I |
T/W | 0.7581 | likely_pathogenic | 0.7784 | pathogenic | -0.83 | Destabilizing | 0.982 | D | 0.613 | neutral | None | None | None | None | I |
T/Y | 0.3652 | ambiguous | 0.3784 | ambiguous | -0.587 | Destabilizing | 0.826 | D | 0.568 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.