Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22965 | 69118;69119;69120 | chr2:178577442;178577441;178577440 | chr2:179442169;179442168;179442167 |
N2AB | 21324 | 64195;64196;64197 | chr2:178577442;178577441;178577440 | chr2:179442169;179442168;179442167 |
N2A | 20397 | 61414;61415;61416 | chr2:178577442;178577441;178577440 | chr2:179442169;179442168;179442167 |
N2B | 13900 | 41923;41924;41925 | chr2:178577442;178577441;178577440 | chr2:179442169;179442168;179442167 |
Novex-1 | 14025 | 42298;42299;42300 | chr2:178577442;178577441;178577440 | chr2:179442169;179442168;179442167 |
Novex-2 | 14092 | 42499;42500;42501 | chr2:178577442;178577441;178577440 | chr2:179442169;179442168;179442167 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.027 | N | 0.633 | 0.159 | 0.310147130316 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1329 | likely_benign | 0.1223 | benign | -1.386 | Destabilizing | 0.027 | N | 0.633 | neutral | N | 0.495670939 | None | None | N |
V/C | 0.5648 | likely_pathogenic | 0.5206 | ambiguous | -1.023 | Destabilizing | 0.935 | D | 0.662 | neutral | None | None | None | None | N |
V/D | 0.2836 | likely_benign | 0.2784 | benign | -1.107 | Destabilizing | 0.317 | N | 0.751 | deleterious | N | 0.460504734 | None | None | N |
V/E | 0.1991 | likely_benign | 0.1979 | benign | -1.081 | Destabilizing | 0.38 | N | 0.693 | prob.neutral | None | None | None | None | N |
V/F | 0.1467 | likely_benign | 0.1302 | benign | -0.967 | Destabilizing | 0.317 | N | 0.717 | prob.delet. | N | 0.463213759 | None | None | N |
V/G | 0.1981 | likely_benign | 0.1946 | benign | -1.726 | Destabilizing | 0.317 | N | 0.731 | prob.delet. | N | 0.490218784 | None | None | N |
V/H | 0.3473 | ambiguous | 0.308 | benign | -1.164 | Destabilizing | 0.824 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/I | 0.0729 | likely_benign | 0.0663 | benign | -0.547 | Destabilizing | None | N | 0.365 | neutral | N | 0.472447363 | None | None | N |
V/K | 0.192 | likely_benign | 0.1877 | benign | -1.251 | Destabilizing | 0.081 | N | 0.692 | prob.neutral | None | None | None | None | N |
V/L | 0.1349 | likely_benign | 0.1168 | benign | -0.547 | Destabilizing | None | N | 0.279 | neutral | N | 0.485472588 | None | None | N |
V/M | 0.109 | likely_benign | 0.0953 | benign | -0.497 | Destabilizing | 0.38 | N | 0.661 | neutral | None | None | None | None | N |
V/N | 0.1837 | likely_benign | 0.1608 | benign | -1.119 | Destabilizing | 0.38 | N | 0.751 | deleterious | None | None | None | None | N |
V/P | 0.767 | likely_pathogenic | 0.7415 | pathogenic | -0.791 | Destabilizing | 0.555 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/Q | 0.1883 | likely_benign | 0.1872 | benign | -1.222 | Destabilizing | 0.38 | N | 0.709 | prob.delet. | None | None | None | None | N |
V/R | 0.1886 | likely_benign | 0.1859 | benign | -0.755 | Destabilizing | 0.001 | N | 0.636 | neutral | None | None | None | None | N |
V/S | 0.133 | likely_benign | 0.1238 | benign | -1.667 | Destabilizing | 0.081 | N | 0.683 | prob.neutral | None | None | None | None | N |
V/T | 0.1069 | likely_benign | 0.0954 | benign | -1.517 | Destabilizing | 0.002 | N | 0.471 | neutral | None | None | None | None | N |
V/W | 0.7455 | likely_pathogenic | 0.7043 | pathogenic | -1.168 | Destabilizing | 0.935 | D | 0.748 | deleterious | None | None | None | None | N |
V/Y | 0.3995 | ambiguous | 0.3527 | ambiguous | -0.869 | Destabilizing | 0.555 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.