Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22967 | 69124;69125;69126 | chr2:178577436;178577435;178577434 | chr2:179442163;179442162;179442161 |
N2AB | 21326 | 64201;64202;64203 | chr2:178577436;178577435;178577434 | chr2:179442163;179442162;179442161 |
N2A | 20399 | 61420;61421;61422 | chr2:178577436;178577435;178577434 | chr2:179442163;179442162;179442161 |
N2B | 13902 | 41929;41930;41931 | chr2:178577436;178577435;178577434 | chr2:179442163;179442162;179442161 |
Novex-1 | 14027 | 42304;42305;42306 | chr2:178577436;178577435;178577434 | chr2:179442163;179442162;179442161 |
Novex-2 | 14094 | 42505;42506;42507 | chr2:178577436;178577435;178577434 | chr2:179442163;179442162;179442161 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.205 | 0.127 | 0.0401082797425 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1593 | likely_benign | 0.1473 | benign | -0.693 | Destabilizing | 0.007 | N | 0.672 | neutral | None | None | None | None | N |
N/C | 0.1963 | likely_benign | 0.1779 | benign | 0.17 | Stabilizing | 0.356 | N | 0.751 | deleterious | None | None | None | None | N |
N/D | 0.1251 | likely_benign | 0.116 | benign | -0.038 | Destabilizing | 0.012 | N | 0.55 | neutral | N | 0.416099087 | None | None | N |
N/E | 0.2655 | likely_benign | 0.2321 | benign | 0.009 | Stabilizing | 0.016 | N | 0.577 | neutral | None | None | None | None | N |
N/F | 0.5486 | ambiguous | 0.4947 | ambiguous | -0.673 | Destabilizing | 0.356 | N | 0.768 | deleterious | None | None | None | None | N |
N/G | 0.1792 | likely_benign | 0.1708 | benign | -0.98 | Destabilizing | 0.007 | N | 0.458 | neutral | None | None | None | None | N |
N/H | 0.088 | likely_benign | 0.0727 | benign | -0.797 | Destabilizing | 0.295 | N | 0.655 | neutral | N | 0.456638988 | None | None | N |
N/I | 0.2842 | likely_benign | 0.2514 | benign | 0.008 | Stabilizing | 0.055 | N | 0.759 | deleterious | N | 0.481324002 | None | None | N |
N/K | 0.19 | likely_benign | 0.1546 | benign | -0.109 | Destabilizing | 0.012 | N | 0.582 | neutral | N | 0.427796161 | None | None | N |
N/L | 0.2412 | likely_benign | 0.2294 | benign | 0.008 | Stabilizing | 0.016 | N | 0.712 | prob.delet. | None | None | None | None | N |
N/M | 0.3199 | likely_benign | 0.2924 | benign | 0.394 | Stabilizing | 0.628 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/P | 0.4654 | ambiguous | 0.4659 | ambiguous | -0.196 | Destabilizing | None | N | 0.531 | neutral | None | None | None | None | N |
N/Q | 0.2248 | likely_benign | 0.1892 | benign | -0.616 | Destabilizing | 0.072 | N | 0.679 | prob.neutral | None | None | None | None | N |
N/R | 0.2308 | likely_benign | 0.1863 | benign | -0.113 | Destabilizing | 0.072 | N | 0.675 | neutral | None | None | None | None | N |
N/S | 0.0588 | likely_benign | 0.0634 | benign | -0.592 | Destabilizing | None | N | 0.205 | neutral | N | 0.428873597 | None | None | N |
N/T | 0.0843 | likely_benign | 0.081 | benign | -0.359 | Destabilizing | None | N | 0.257 | neutral | N | 0.369094574 | None | None | N |
N/V | 0.2676 | likely_benign | 0.2354 | benign | -0.196 | Destabilizing | 0.016 | N | 0.707 | prob.neutral | None | None | None | None | N |
N/W | 0.6697 | likely_pathogenic | 0.6352 | pathogenic | -0.499 | Destabilizing | 0.864 | D | 0.767 | deleterious | None | None | None | None | N |
N/Y | 0.1495 | likely_benign | 0.1316 | benign | -0.289 | Destabilizing | 0.295 | N | 0.76 | deleterious | N | 0.4539454 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.